HEV-C seqs

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HEV-C seqs

Genera
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Cardiovirus
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Genus: Enterovirus

Species: Human enterovirus C

Serotype: Coxsackievirus A1 (CV-A1)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Coxsackievirus A11 (CV-A11)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Coxsackievirus A13 (CV-A13)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Coxsackievirus A17 (CV-A17)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Coxsackievirus A19 (CV-A19)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Coxsackievirus A20 (CV-A20)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Coxsackievirus A21 (CV-A21)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Coxsackievirus A22 (CV-A22)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Coxsackievirus A24 (CV-A24)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Enterovirus 95 (EV-95)
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Enterovirus 96 (EV-96)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Enterovirus 99 (EV-99)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Enterovirus 102 (EV-102)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Enterovirus 104 (EV-104)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Enterovirus 105 (EV-105)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Enterovirus 109 (EV-109)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
     

(White areas indicate genes which haven't yet been sequenced completely;
grey areas are where only partial sequences exist)

References

Virus Strain Region

Length

Accession No.

 Reference Comments

Coxsackievirus A1 (CV-A1)
CV-A1 T.T. (Tompkins)* (Coxsackie, NY/47) 5'NCR(p),1AB(p),3'NCR(p) 199,210,57 X87584 Pulli et al., 1995  
VP1 888

AF081293

 Oberste et al., 1999  
CG 7397 AF499635 Brown et al., 2003  

Coxsackievirus A11 (CV-A11)
CV-A11 Belgium 1* (Belgium/51) 5'NCR(p),1AB(p),3D(p),3'NCR(p) 199,210,387,55 X87592 Pulli et al., 1995  
VP1 912 AF081301 Oberste et al., 1999  
CG 7453 AF499636 Brown et al., 2003  
CV-A11 G-9* (South Africa/50)
(formerly CV-A15)		 5'NCR(p),3D(p),3'NCR(p) 199,387,55 X87596 Pulli et al., 1995  
VP2(p) ? ? Oberste et al., 1998  
VP1 912 AF081305 Oberste et al., 1999  
CG 7441 AF499638 Brown et al., 2003  
CG 7441 AF465512 Newcombe et al., 2003  

Coxsackievirus A13 (CV-A13)
CV-A13 Flores* (Mexico/52) 5'NCR(p),1AB(p),3D(p),3'NCR(p) 199,210,387,55 X87594 Pulli et al., 1995  
VP1 927 AF081303 Oberste et al., 1999  
CG 7458 AF499637 Brown et al., 2003  
CG 7458 AF465511 Newcombe et al., 2003  
CV-A13 G-13* (South Africa/50)
(formerly CV-A18)		 5'NCR(p),1AB(p),3D(p),3'NCR(p) 199,210,387,55 X87598 Pulli et al., 1995  
VP2(p) ? ? Oberste et al., 1998  
VP1 927 AF081307 Oberste et al., 1999  
CG 7458 AF499640 Brown et al., 2003  
CG 7457 AF465513 Newcombe et al., 2003  
CV-A13 BAN00-10494 CG 7457 DQ995639 Brown et al., 2009  

Coxsackievirus A17 (CV-A17)
CV-A17 G-12* (South Africa/51) 5'NCR(p),1AB(p),3D(p),3'NCR(p) 199,210,387,55 X87597 Pulli et al., 1995  
VP1 918 AF081306 Oberste et al., 1999  
CG 7457 AF499639 Brown et al., 2003  

Coxsackievirus A19 (CV-A19)
CV-A19 NIH-8663 (Dohi)* (Japan/52) 3D(p),3'NCR(p) 387,57 X87599 Pulli et al., 1995  
VP2(p) ? ? Oberste et al., 1998  
VP1 888 AF081308 Oberste et al., 1999  
CG 7410 AF499641 Brown et al., 2003  

Coxsackievirus A20 (CV-A20)
CV-A20 IH-35* (New York/55) 5'NCR(p),1AB(p),3D(p) 199,210,387 X87600 Pulli et al., 1995  
VP1 909 AF081309 Oberste et al., 1999  
CG 7436 AF499642 Brown et al., 2003  
CG 7436 AF465514 Newcombe et al., 2003  
CV-A20a Tulane 1623 (Louisiana/51) 5'NCR(p),3D(p) 200,387 X87601 Pulli et al., 1995  
CV-A20b Cecil P2647 (South Africa/51) 5'NCR(p),1AB(p),3D(p) 198,210,387 X87602 Pulli et al., 1995  
CV-A20 BAN01-10618 CG 7441 EF015014 Brown et al., 2009  

Coxsackievirus A21 (CV-A21)
CV-A21 Coe (California/54) CG 7401 D00538 Hughes et al., 1989  
5' NCR(p) 260 AF068880
 AF076999		 Muir et al., unpublished  
CV-A21 Kuykendall* (California/52) CG 7406 AF546702 Brown et al., 2003  
CG 7405 AF465515 Newcombe et al., 2003  
CV-A21 272101 P1 2637 AY319942 Newcombe et al., 2004  
CV-A21 275238 P1 2637 AY319943 Newcombe et al., 2004  
CV-A21 272598 P1 2637 AY319944 Newcombe et al., 2004  
CV-A21 BAN00-10467 CG 7440 EF015031 Brown et al., 2009  

Coxsackievirus A22 (CV-A22)
CV-A22 Chulman* (New York/55) 5'NCR(p),3D(p),3'NCR(p) 197,387,57 X87603 Pulli et al., 1995  
VP2(p) ? ? Oberste et al., 1998  
VP1 888 AF081310 Oberste et al., 1999  
CG 7406 AF499643 Brown et al., 2003  
CV-A22 USA75-10624 CG 7402 DQ995648 Brown et al., 2009  

Coxsackievirus A24 (CV-A24)
CV-A24 Joseph* 5' NCR(p) 255 AF068881 Muir et al., unpublished  
VP2(p) ? ? Oberste et al., 1998  
VP1 915 AF081311 Oberste et al., 1999  
CV-A24' DN-19 VP2(p) ? ? Oberste et al., 1998  
VP1 915 AF081347 Oberste et al., 1999  
CV-A24v EH 24/70 (Singapore/70) CG 7461 D90457 Supanaranond et al., 1992  

Enterovirus 95 (EV-95)
EV-95 5-05* VP1   N/A Norder et al., unpublished  

Enterovirus 96 (EV-96)
EV-96 SVK03-24 VP1 927 EF364404 Smura et al., 2007  
3D(p) 459 EF364411 Smura et al., 2007  
EV-96 10488 VP1 927 AY919472 Oberste et al., 2006  
EV-96 BAN00-10488* CG 7478 EF015886 Brown et al., 2009  
EV-96 10548c VP1(p) 477 AY919538 Oberste et al., 2006  
EV-96 FIN04-7 CG 7475 FJ751914 Smura et al., 2009  
EV-96 FIN05-2 CG 7471 FJ751915 Smura et al., 2009  

Enterovirus 99 (EV-99)
EV-99 10461-ban00* VP1 909 AY919447 Oberste et al., 2006  
EV-99 USA-GA84-10636 CG 7447 EF555644 Brown et al., 2009  

Enterovirus 102 (EV-102)
EV-102 10424-BAN99* VP1 909 AY919409 Oberste et al., 2006  
EV-102 BAN99-10424* CG 7438 EF555645 Brown et al., 2009  

Enterovirus 104 (EV-104)
EV-104 CL-1231094 FL* CG 7229 EU840733 Tapparel et al., 2009  

Enterovirus 105 (EV-105)
EV-105 TW/NTU07-1841* VP1   N/A Cheng et al., unpublished  

Enterovirus 109 (EV-109)
EV-109 NICA08-4327* CG   GQ865517 Yozwiak et al., 2010  
CG, complete genome
(p), partial gene sequence
*, prototype strain

References

 

 
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