|
|
Genus: Enterovirus
Species: Human enterovirus D
| Serotype: Enterovirus 68 (EV-68) |
|
| 5' UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
|
Serotype: Enterovirus 70 (EV-70) |
|
| 5' UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
|
Serotype: Enterovirus 94 (EV-94) |
|
| 5' UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
(White areas indicate genes which haven't yet
been sequenced completely;
grey areas are where only partial sequences exist)
References
| Virus |
Strain |
Region
|
Length
|
Accession No. |
Reference |
Comments |
Enterovirus 68 (EV-68) (now incl. human rhinovirus
87)
|
| EV-68 |
Fermon*
(California/62) |
5'NCR(p),VP0(p),3D(p) |
199, 210, 387 |
X87604 |
Pulli et al., 1995 |
|
|
VP1 |
936 |
AF081348 |
Oberste et al., 1999 |
|
|
CG |
7367 |
AY426531 |
Oberste et al., 2004b |
|
| EV-68 |
Fermon*
(California/62)
VR-561 |
5'
UTR(p) |
602 |
AY062274 |
Blomqvist
et al., 2002 |
|
|
VP4+VP2(p) |
408 |
AY062276 |
Blomqvist
et al., 2002 |
|
|
VP1(p) |
324 |
AY062278 |
Blomqvist
et al., 2002 |
|
| 3D(p) |
432 |
AY062282 |
Blomqvist
et al., 2002 |
|
| EV-68 |
Fermon*
(California/62)
VR-1076 |
5'
UTR(p) |
602 |
AY062275 |
Blomqvist
et al., 2002 |
|
|
VP4+VP2(p) |
408 |
AY062277 |
Blomqvist
et al., 2002 |
|
|
VP1(p) |
324 |
AY062279 |
Blomqvist
et al., 2002 |
|
| 3D(p) |
432 |
AY062281 |
Blomqvist
et al., 2002 |
|
| EV-68 |
98/30259-37/99 |
VP1(p) |
354 |
AY208116 |
Norder et al., 2003 |
|
EV-68
(formerly
HRV-87) |
F02-3607-Corn* |
5' UTR(p) |
506
|
AF108187
|
Andeweg et al.,
1999 |
|
| 5' UTR(p) |
602 |
AY062273 |
Blomqvist
et al., 2002 |
|
| VP4(p)+VP2(p) |
417 |
AY040243 |
Savolainen et al.,
2002 |
|
|
VP1(p) |
324 |
AY062280 |
Blomqvist
et al., 2002 |
|
| VP1 |
936
|
AY355268 |
Ledford et al.,
unpub. |
|
| 3D(p) |
432 |
AY062283 |
Blomqvist
et al., 2002 |
|
| EV68 |
37-99 (France) |
CG |
7333 |
EF107098 |
Smura et al., 2007 |
|
Enterovirus 70 (EV-70)
|
| EV-70 |
J670/71* (Japan/71) |
CG |
7390 |
D00820 |
Ryan et al., 1990 |
|
| CG |
7390 |
download |
Takeda, 1989 |
|
| CG |
7391 |
DQ201177 |
Kim and Racaniello, unpub. |
|
| EV-70 |
ENG/71
|
VP1 |
918
|
D17595 |
Takeda et al., 1994 |
|
| EV-70 |
FB/73
|
VP1 |
918
|
D17596 |
Takeda et al., 1994 |
|
| EV-70 |
G10/72
|
VP1 |
918
|
D17597 |
Takeda et al., 1994 |
|
| EV-70 |
HP185/81
|
VP1 |
918
|
D17598 |
Takeda et al., 1994 |
|
| EV-70 |
HP85/78
|
VP1 |
918
|
D17599 |
Takeda et al., 1994 |
|
| EV-70 |
I/72
|
VP1 |
918
|
D17600 |
Takeda et al., 1994 |
|
| EV-70 |
?
|
VP1 |
918
|
D17601 |
Takeda et al., 1994 |
|
| EV-70 |
J670/71
|
VP1 |
918
|
D17602 |
Takeda et al., 1994 |
|
| EV-70 |
M51/76
|
VP1 |
918
|
D17603 |
Takeda et al., 1994 |
|
| EV-70 |
M8/72
|
VP1 |
918
|
D17604
|
Takeda et al., 1994 |
|
| EV-70 |
R20/71
|
VP1 |
918
|
D17605 |
Takeda et al., 1994 |
|
| EV-70 |
R6/71
|
VP1 |
918
|
D17606 |
Takeda et al., 1994 |
|
| EV-70 |
SEC32/71
|
VP1 |
918
|
D17607 |
Takeda et al., 1994 |
|
| EV-70 |
T260/74
|
VP1 |
918
|
D17608 |
Takeda et al., 1994 |
|
| EV-70 |
T62/73
|
VP1 |
918
|
D17609 |
Takeda et al., 1994 |
|
| EV-70 |
TW266/81
|
VP1 |
918
|
D17610 |
Takeda et al., 1994 |
|
| EV-70 |
V1250/81
|
VP1 |
918
|
D17611 |
Takeda et al., 1994 |
|
| EV-70 |
V1635/81
|
VP1 |
918
|
D17612 |
Takeda et al., 1994 |
|
| EV-70 |
G110/81 |
VP2(p) |
174 |
D45233 |
Yamazaki et al., unpub. |
Genome position: 1080-1253 |
| VP3(p) |
178 |
D45237 |
Yamazaki et al., unpub. |
Genome position: 2210-2387 |
| VP1(p) |
332 |
D45229 |
Yamazaki et al., unpub. |
Genome position: 2630-2961 |
| EV-70 |
G2/74 |
VP2(p) |
174 |
D45231 |
Yamazaki et al., unpub. |
Genome position: 1080-1253 |
| VP3(p) |
178 |
D45235 |
Yamazaki et al., unpub. |
Genome position: 2210-2387 |
| VP1(p) |
332 |
D45227 |
Yamazaki et al., unpub. |
Genome position: 2630-2961 |
| EV-70 |
Kumoi-2/93 |
VP2(p) |
174 |
D45234 |
Yamazaki et al., unpub. |
Genome position: 1080-1253 |
| VP3(p) |
178 |
D45238 |
Yamazaki et al., unpub. |
Genome position: 2210-2387 |
| VP1(p) |
332 |
D45230 |
Yamazaki et al., unpub. |
Genome position: 2630-2961 |
| EV-70 |
M42/76 |
VP2(p) |
174 |
D45232 |
Yamazaki et al., unpub. |
Genome position: 1080-1253 |
| VP3(p) |
178
|
D45236
|
Yamazaki et al., unpub |
Genome position: 2210-2387 |
| VP1(p) |
332
|
D45228
|
Yamazaki et al., unpub |
Genome position: 2630-2961 |
| EV-70 |
B2556
|
5' UTR(p) |
393
|
Z78125 |
Shulman et al., 1997 |
|
| EV-70 |
B2579
|
VP1(p) |
61
|
Z78126 |
Shulman et al., 1997 |
|
| EV-70 |
B2591
|
5' UTR(p) |
394
|
Z78127 |
Shulman et al., 1997 |
|
| VP1(p) |
61
|
Z78128 |
Shulman et al., 1997 |
|
| EV-70 |
B2592
|
5' UTR(p) |
358
|
Z78129 |
Shulman et al., 1997 |
|
| VP1(p) |
61
|
Z78132 |
Shulman et al., 1997 |
|
| EV-70 |
B2592, TC isolate
|
5' UTR(p) |
358
|
Z78130 |
Shulman et al., 1997 |
|
| VP1(p) |
61
|
Z78131
|
Shulman et al., 1997 |
|
| EV-70 |
B2599
|
5' UTR(p) |
394
|
Z78133
|
Shulman et al., 1997 |
|
| VP1(p) |
61
|
Z78134 |
Shulman et al., 1997 |
|
| EV-70 |
B2602
|
VP1(p) |
61
|
Z78135 |
Shulman et al., 1997 |
|
| EV-70 |
B2603
|
VP1(p) |
61
|
Z78136 |
Shulman et al., 1997 |
|
| EV-70 |
B3079
|
5' UTR(p) |
394
|
Z78137 |
Shulman et al., 1997 |
|
| VP1(p) |
61
|
Z78138 |
Shulman et al., 1997 |
|
| EV-70 |
J760/71 lab passage in Israel
|
5' UTR(p) |
394
|
Z78139 |
Shulman et al., 1997 |
|
| VP1(p) |
61
|
Z78140 |
Shulman et al., 1997 |
|
| EV-70 |
MNC9/94/Japan
|
VP1(p) |
332
|
AB005258 |
Uchio et al., 1996 |
|
Enterovirus 94 (EV-94)
|
| EV-94 |
E210* (Egypt) |
CG |
7364 |
DQ916376 |
Smura et al.,
2007 |
|
| EV-94 |
E430 (Egypt) |
VP1 |
933 |
DQ916377 |
Smura et al.,
2007 |
|
| EV-94 |
E435 (Egypt) |
VP1 |
933 |
DQ916378 |
Smura et al.,
2007 |
|
| EV-94 |
E438 (Egypt) |
VP1 |
933 |
DQ916379 |
Smura et al.,
2007 |
|
| EV-94 |
19/04 (DRC) |
CG |
7331 |
EF107097 |
Smura et al., 2007 |
|
| |
|
|
|
|
|
|
CG, complete genome
(p), partial gene sequence
*, prototype strain |
|
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