|
|
| |
Genus: Rhinovirus
Species: Human rhinovirus A (HRV-A)
| Serotype: Human rhinovirus 1 (HRV-1) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 2 (HRV-2) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 7 (HRV-7) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 8 (HRV-8) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 9 (HRV-9) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 10 (HRV-10) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 11 (HRV-11) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 12 (HRV-12) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 13 (HRV-13) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 15 (HRV-15) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 16 (HRV-16) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 18 (HRV-18) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 19 (HRV-19) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 20 (HRV-20) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 21 (HRV-21) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 22 (HRV-22) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 23 (HRV-23) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 24 (HRV-24) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 25 (HRV-25) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 28 (HRV-28) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 29 (HRV-29) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 30 (HRV-30) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 31 (HRV-31) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 32
(HRV-32) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 33 (HRV-33) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 34 (HRV-34) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 36 (HRV-36) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 38 (HRV-38) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 39 (HRV-39) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 40
(HRV-40) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 41 (HRV-41) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype:
Human rhinovirus 43 (HRV-43) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 44 (HRV-44) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 45 (HRV-45) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 46
(HRV-46) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 47 (HRV-47) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 49 (HRV-49) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 50 (HRV-50) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 51 (HRV-51) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 53 (HRV-53) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 54 (HRV-54) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 55 (HRV-55) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 56 (HRV-56) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 57
(HRV-57) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 58 (HRV-58) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 59 (HRV-59) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 60 (HRV-60) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 61 (HRV-61) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 62 (HRV-62) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 63 (HRV-63) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 64 (HRV-64) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 65 (HRV-65) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 66 (HRV-66) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 67 (HRV-67) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 68 (HRV-68) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 71 (HRV-71) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 73 (HRV-73) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 74 (HRV-74) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 75 (HRV-75) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 76 (HRV-76) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 77 (HRV-77) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 78 (HRV-78) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 80
(HRV-80) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 81
(HRV-81) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 82
(HRV-82) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 85 (HRV-85) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 88
(HRV-88) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 89 (HRV-89) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 90
(HRV-90) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 94
(HRV-94) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 95
(HRV-95) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 96
(HRV-96) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 98
(HRV-98) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: Human rhinovirus 100
(HRV-100) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| |
|
|
(White areas indicate genes which haven't yet been
sequenced completely; grey areas are where only partial sequences
exist)
References
| Serotypes: HRV-1, 2, 7, 8, 9, 10, 11, 12, 13, 15, 16, 18, 19,
20, 21, 22, 23, 24, 25, 28, 29, 30, 31, 32, 33, 34, 36, 38, 39, 40, 41,
43, 44, 45, 46, 47, 49, 50, 51, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62,
63, 64, 65, 66, 67, 68, 71, 73, 74, 75, 76, 77, 78, 80, 81, 82, 85, 88,
89, 90, 94, 95, 96, 98, 100. |
| Virus |
Strain |
Region |
Length |
Accession
No. |
Reference |
Comments |
Human rhinovirus 1 (HRV-1) |
| HRV-1A |
2060 (Ohio)
(ATCC VR-1559) |
CG |
|
FJ445111 |
Palmenberg et al.,
2009 |
|
| 5' UTR+P1 |
3125 |
download |
G. Cordova, unpub.(also
see: Kim et al., 1989) |
|
| VP4+VP2(p) |
420 |
AF343633 |
Savolainen et al., 2002 |
|
| VP3(p)+VP1+2A(p) |
1356 |
AY458604 |
Laine et al.,
unpublished |
|
|
VP1 |
861 |
AY355181 |
Ledford et al.,
unpub. |
|
| 3B |
63 |
M12166 |
Werner et al.,
1986 |
|
| 3A-3C |
1206 |
M12169 |
Werner et al., 1986;
Aschauer et al., 1991 |
see also:
M73790 |
| 3D(p) |
468 |
AY436674 |
Savolainen et al., unpublished |
|
| HRV-1B
|
B632 |
CG |
7133 |
D00239 |
Hughes et al.,
1988 |
|
| 5'UTR(p) |
259 |
Z29656 |
Mori and Clewley, 1994 |
|
|
VP1 |
861 |
AY355182 |
Ledford et al.,
unpub. |
|
| 3D(p) |
468 |
AY436673 |
Savolainen et al., unpublished |
|
Human rhinovirus 2 (HRV-2) |
| HRV-2
|
HGP |
CG |
7102 |
X02316 |
Skern et al.,
1985 |
|
|
VP1 |
849 |
AY355183 |
Ledford et al.,
unpub. |
|
| HRV-2 |
CA90-0150 |
VP1(p) |
307 |
AF152253 |
Oberste et al., 2000 |
|
Human rhinovirus 7 (HRV-7) |
| HRV-7 |
68-CV11 |
CG |
7146 |
DQ473503 |
Kistler et al.,
2007 |
|
| VP2(p) |
336 |
Z47564 |
Horsnell et al.,
1995 |
|
| VP4+VP2(p) |
420 |
AF343589 |
Savolainen et al., 2002 |
|
|
VP1 |
873 |
AY355188 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1374
|
AY450513
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436677 |
Savolainen et al., unpublished |
|
Human rhinovirus 8 (HRV-8) |
| HRV-8 |
MRH-CV12
(ATCC VR-1118) |
CG |
|
FJ445113 |
Palmenberg et al.,
2009 |
|
|
VP4+VP2(p) |
420 |
AF343594 |
Savolainen et al., 2002 |
|
|
VP1 |
852 |
AY355189 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1357
|
AY450519
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436682 |
Savolainen et al., unpublished |
|
Human rhinovirus 9 (HRV-9) |
| HRV-9 |
211-CV13
(ATCC VR-489) |
CG |
7128 |
download |
Leckie, 1988 |
|
| CG |
|
FJ445177 |
Palmenberg et al.,
2009 |
|
| VP4+VP2(p) |
420 |
AF343605 |
Savolainen et al., 2002 |
|
|
VP1 |
867 |
AY355190 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1381
|
AY450525
|
Laine et al., unpub. |
|
|
HRV-9 |
F01 |
CG |
|
FJ445114 |
Palmenberg et al.,
2009 |
|
|
HRV-9 |
F02 |
CG |
|
FJ445115 |
Palmenberg et al.,
2009 |
|
Human rhinovirus 10 (HRV-10) |
| HRV-10 |
204-CV14 |
CG |
7137 |
DQ473498 |
Kistler et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343609 |
Savolainen et al., 2002 |
|
|
VP1 |
864 |
AY355191 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1387
|
AY450464
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436659 |
Savolainen et al., unpublished |
|
Human rhinovirus 11 (HRV-11) |
| HRV-11 |
1-CV15 |
CG |
7125 |
EF173414 |
Tapparel et al.,
2007 |
|
| VP2(p) |
327 |
Z47565 |
Horsnell et al.,
1995 |
|
| VP4+VP2(p) |
420 |
AF343623 |
Savolainen et al., 2002 |
|
|
VP1 |
858 |
AY355192 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1372
|
AY450465
|
Laine et al., unpub. |
|
Human rhinovirus 12 (HRV-12) |
| HRV-12 |
181-CV16 |
CG |
7124 |
EF173415 |
Tapparel et al., 2007 |
|
| VP4+VP2(p) |
420 |
AY016405 |
Savolainen et al., 2002 |
|
|
VP1 |
861 |
AY355193 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1236
|
AY450466
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436648 |
Savolainen et al., unpublished |
|
Human rhinovirus 13 (HRV-13) |
| HRV-13 |
353 (South Carolina/59) |
CG |
7140 |
FJ445116 |
Palmenberg et al.,
2009 |
|
| VP4+VP2(p) |
420 |
AF343599 |
Savolainen et al., 2002 |
|
|
VP1 |
870 |
AY355194 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1394
|
AY450467
|
Laine et al., unpub. |
|
| HRV-13 |
F03 (USA) |
CG |
7143 |
FJ445117 |
Palmenberg et al., 2009 |
|
Human rhinovirus 15 (HRV-15) |
| HRV-15 |
1734 (South
Carolina/60) |
CG |
7134 |
DQ473493 |
Kistler et al.,
2007 |
|
| P1+2A(p) |
2612 |
download |
J. Margolis & B.E.
Clarke, unpub. |
|
| 5'UTR(p) |
254 |
Z29654 |
Mori and Clewley, 1994 |
|
| VP4+VP2(p) |
420 |
AF343630 |
Savolainen et al., 2002 |
|
|
VP1 |
870 |
AY355196 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1355
|
AY450468
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436669 |
Savolainen et al., unpublished |
|
Human rhinovirus 16 (HRV-16) |
| HRV-16 |
11757 (Washington
DC/60) |
CG |
7124 |
L24917 |
Lee et al., 1994 |
|
| VP1 |
855 |
AY355197 |
Ledford et al.,
unpub. |
|
Human rhinovirus 18 (HRV-18) |
| HRV-18 |
5986-CV17 |
CG |
7119 |
FJ445118 |
Palmenberg et al.,
2009 |
|
| VP4+VP2(p) |
420 |
AY016407 |
Savolainen et al., 2002 |
|
|
VP1 |
861 |
AY355199 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1378
|
AY450469
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436651 |
Savolainen et al., unpublished |
|
Human rhinovirus 19 (HRV-19) |
| HRV-19 |
6072-CV18 |
VP4+VP2(p) |
420 |
AF343632 |
Savolainen et al., 2002 |
|
|
VP1 |
870 |
AY355200 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1384
|
AY450470
|
Laine et al., unpub. |
|
Human rhinovirus 20 (HRV-20) |
| HRV-20 |
15-CV19 |
VP4+VP2(p) |
417 |
AF343644 |
Savolainen et al., 2002 |
|
|
VP1 |
891 |
AY355201 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1400
|
AY450471
|
Laine et al., unpub. |
|
Human rhinovirus 21 (HRV-21) |
| HRV-21 |
47-CV21 |
VP2(p) |
336 |
Z47566 |
Horsnell et al.,
1995 |
|
| VP4+VP2(p) |
420 |
AF343626 |
Savolainen et al., 2002 |
|
|
VP1 |
861 |
AY355202 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1391
|
AY450472
|
Laine et al., unpub. |
|
| HRV-21 |
Hanks2102 |
VP4+VP2(p) |
416 |
AY040234 |
Savolainen et al., 2002 |
|
| VP1 |
861 |
AY355180 |
Ledford et al., unpub. |
95.7% match with
HRV-21 |
| VP3(p)+VP1+2A(p) |
1367
|
AY450462
|
Laine et al., unpub. |
|
Human rhinovirus 22 (HRV-22) |
| HRV-22 |
127-CV22 |
VP4+VP2(p) |
420 |
AF343628 |
Savolainen et al., 2002 |
|
|
VP1 |
867 |
AY355203 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1377
|
AY450473
|
Laine et al., unpub. |
|
Human rhinovirus 23 (HRV-23) |
| HRV-23 |
5124-CV24 |
CG |
7025 |
DQ473497 |
Kistler et al., 2007 |
missing part of 5' UTR |
| VP4+VP2(p) |
420 |
AF343597 |
Savolainen et al., 2002 |
|
|
VP1 |
849 |
AY355204 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1321
|
AY450474
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436666 |
Savolainen et al., unpublished |
|
Human rhinovirus 24 (HRV-24) |
| HRV-24 |
5146-CV25 |
CG |
7132 |
EF173416 |
Tapparel et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343619 |
Savolainen et al., 2002 |
|
|
VP1 |
855 |
AY355205 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1378
|
AY450475
|
Laine et al., unpub. |
|
Human rhinovirus 25 (HRV-25) |
| HRV-25 |
5426-CV26 |
VP4+VP2(p) |
420 |
AF343617 |
Savolainen et al., 2002 |
|
|
VP1 |
846 |
AY355206 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1349
|
AY450476
|
Laine et al., unpub. |
|
Human rhinovirus 28 (HRV-28) |
| HRV-28
|
6101-CV29 |
CG |
7148 |
DQ473508 |
Kistler et al., 2007 |
|
| VP4+VP2(p) |
420 |
AY016406 |
Savolainen et al., 2002 |
|
|
VP1 |
873 |
AY355209 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1403
|
AY450477
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436678 |
Savolainen et al., unpublished |
|
Human rhinovirus 29 (HRV-29) |
| HRV-29 |
5582-CV30 |
VP2(p) |
333 |
Z47567 |
Horsnell et al.,
1995 |
|
| VP4+VP2(p) |
420 |
AF343615 |
Savolainen et al., 2002 |
|
| VP1 |
843 |
AY273202 |
Vlasak et al.,
2003 |
|
| VP3(p)+VP1+2A(p) |
1315 |
AY458605 |
Laine et al.,
unpublished |
|
|
VP1 |
843 |
AY355210 |
Ledford et al.,
unpub. |
|
Human rhinovirus 30 (HRV-30) |
| HRV-30 |
106F |
CG |
7099 |
DQ473512 |
Kistler et al.,
2007 |
|
| 5'UTR(p) |
255 |
Z29657 |
Mori and Clewley, 1994 |
|
| VP4+VP2(p) |
420 |
AF343596 |
Savolainen et al., 2002 |
|
| VP1 |
849 |
AY273205 |
Vlasak et al.,
2003 |
|
| VP3(p)+VP1+2A(p) |
1382 |
AY458606 |
Laine et al.,
unpublished |
|
|
VP1 |
849 |
AY355211 |
Ledford et al.,
unpub. |
|
Human rhinovirus 31 (HRV-31) |
| HRV-31 |
140F |
5'UTR(p) |
255 |
Z29658 |
Mori and Clewley, 1994 |
|
| VP4+VP2(p) |
420 |
AF343583 |
Savolainen et al., 2002 |
|
| VP1 |
855 |
AY273200 |
Vlasak et al.,
2003 |
|
| VP3(p)+VP1+2A(p) |
1328 |
AY458607 |
Laine et al.,
unpublished |
|
|
VP1 |
855 |
AY355212 |
Ledford et al.,
unpub. |
|
Human rhinovirus 32 (HRV-32) |
| HRV-32 |
363 (South Carolina/59) |
VP4+VP2(p) |
418 |
AF343584 |
Savolainen et al., 2002 |
|
|
VP1 |
867 |
AY355213 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1401
|
AY450478
|
Laine et al., unpub. |
|
Human rhinovirus 33 (HRV-33) |
| HRV-33 |
1200 (South Carolina/59) |
VP4+VP2(p) |
420 |
AF343625 |
Savolainen et al., 2002 |
|
|
VP1 |
858 |
AY355214 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1370
|
AY450479
|
Laine et al., unpub. |
|
Human rhinovirus 34 (HRV-34) |
| HRV-34 |
137-3 |
CG |
7119 |
DQ473501 |
Kistler et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343634 |
Savolainen et al., 2002 |
|
|
VP1 |
861 |
AY355215 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1391
|
AY450480
|
Laine et al., unpub. |
|
Human rhinovirus 36 (HRV-36) |
| HRV-36 |
342H |
CG |
7141 |
DQ473505 |
Kistler et al.,
2007 |
|
| VP2(p) |
336 |
Z49123 |
Horsnell et al.,
1995 |
|
| VP4+VP2(p) |
420 |
AF343588 |
Savolainen et al., 2002 |
|
|
VP1 |
867 |
AY355217 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1405
|
AY450481
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436676 |
Savolainen et al., unpublished |
|
Human rhinovirus 38 (HRV-38) |
| HRV-38 |
CH79 |
CG |
7136 |
DQ473495 |
Kistler et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343614 |
Savolainen et al., 2002 |
|
|
VP1 |
870 |
AY355219 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1386
|
AY450482
|
Laine et al., unpub. |
|
Human rhinovirus 39 (HRV-39) |
| HRV-39 |
209 (Maryland/62) |
CG |
7137 |
AY751783 |
Harris and
Racaniello, 2005 |
|
| VP4+VP2(p) |
420 |
AF343637 |
Savolainen et al., 2002 |
|
| VP1 |
873 |
download |
G. Cordova, unpub. |
|
|
VP1 |
855 |
AY355220 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1345
|
AY450483
|
Laine et al., unpub. |
|
Human rhinovirus 40 (HRV-40) |
| HRV-40 |
1794 (North Carolina/61) |
VP4+VP2(p) |
390 |
AF343641 |
Savolainen et al., 2002 |
|
|
VP1 |
858 |
AY355221 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1379
|
AY450484
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436654 |
Savolainen et al., unpublished |
|
Human rhinovirus 41 (HRV-41) |
| HRV-41 |
56110 (North
Carolina/61) |
CG |
7145 |
DQ473491 |
Kistler et al.,
2007 |
|
| 5'UTR(p) |
257 |
Z29659 |
Mori and Clewley, 1994 |
|
| VP4+VP2(p) |
420 |
AF343600 |
Savolainen et al., 2002 |
|
|
VP1 |
873 |
AY355222 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1364
|
AY450485
|
Laine et al., unpub. |
|
Human rhinovirus 43 (HRV-43) |
| HRV-43 |
58750 (North Carolina/61) |
VP4+VP2(p) |
420 |
AY040232 |
Savolainen et al., 2002 |
|
|
VP1 |
867 |
AY355224 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1373
|
AY450486
|
Laine et al., unpub. |
|
Human rhinovirus 44 (HRV-44) |
| HRV-44 |
71560 (North
Carolina/61) |
CG |
7123 |
DQ473499 |
Kistler et al.,
2007 |
|
| 5'UTR(p) |
254 |
Z29660 |
Mori and Clewley, 1994 |
|
| VP4+VP2(p) |
420 |
AF343616 |
Savolainen et al., 2002 |
|
| VP1 |
843 |
AY273203 |
Vlasak et al.,
2003 |
|
| VP3(p)+VP1+2A(p) |
1374 |
AY458608 |
Laine et al.,
unpublished |
|
|
VP1 |
843 |
AY355225 |
Ledford et al.,
unpub. |
|
Human rhinovirus 45 (HRV-45) |
| HRV-45 |
Tippett (Baylor 1) (Texas/64) |
VP4+VP2(p) |
420 |
AY016409 |
Savolainen et al., 2002 |
|
|
VP1 |
849 |
AY355226 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1358
|
AY450487
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436684 |
Savolainen et al., unpublished |
|
Human rhinovirus 46 (HRV-46) |
| HRV-46 |
Crell (Baylor 2) (Texas/64) |
CG |
7149 |
DQ473506 |
Kistler et al., 2007 |
|
| VP4+VP2(p) |
419 |
AY040235 |
Savolainen et al., 2002 |
|
|
VP1 |
879 |
AY355227 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1369
|
AY450488
|
Laine et al., unpub. |
|
Human rhinovirus 47 (HRV-47) |
| HRV-47 |
Calvert (Baylor 3) (Texas/63) |
VP4+VP2(p) |
420 |
AF343607 |
Savolainen et al., 2002 |
|
| VP1 |
855 |
AY273201 |
Vlasak et al.,
2003 |
|
| VP3(p)+VP1+2A(p) |
1361 |
AY458609 |
Laine et al.,
unpublished |
|
|
VP1 |
855 |
AY355228 |
Ledford et al.,
unpub. |
|
Human rhinovirus 49 (HRV-49) |
| HRV-49 |
8213 |
CG |
7106 |
DQ473496 |
Kistler et al.,
2007 |
|
| VP2(p) |
336 |
Z47568 |
Horsnell et al.,
1995 |
|
| VP4+VP2(p) |
420 |
AF343598 |
Savolainen et al., 2002 |
|
| VP1 |
849 |
download |
G. Cordova, unpub. |
|
| VP1 |
849 |
AY273206 |
Vlasak et al.,
2003 |
|
| VP3(p)+VP1+2A(p) |
1368 |
AY458610 |
Laine et al.,
unpublished |
|
|
VP1 |
849 |
AY355230 |
Ledford et al.,
unpub. |
|
| 3D(p) |
468 |
AY436665 |
Savolainen et al., unpublished |
|
Human rhinovirus 50 (HRV-50) |
| HRV-50 |
A2-58 |
P1 |
2829 |
download |
Dan Pevear, Sterling
Winthrop, unpub. |
|
| VP2(p) |
336 |
Z47569 |
Horsnell et al.,
1995 |
|
| VP4+VP2(p) |
420 |
AF343635 |
Savolainen et al., 2002 |
|
|
VP1 |
861 |
AY355231 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1368
|
AY450489
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436656 |
Savolainen et al., unpublished |
|
Human rhinovirus 51 (HRV-51) |
| HRV-51 |
F01-4081 |
VP4+VP2(p) |
420 |
AF343585 |
Savolainen et al., 2002 |
|
|
VP1 |
888 |
AY355232 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1397
|
AY450490
|
Laine et al., unpub. |
|
Human rhinovirus 53 (HRV-53) |
| HRV-53 |
F01-3928 |
CG |
7143 |
DQ473507 |
Kistler et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343592 |
Savolainen et al., 2002 |
|
|
VP1 |
876 |
AY355234 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1110
|
AY450491
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436681 |
Savolainen et al., unpublished |
|
Human rhinovirus 54 (HRV-54) |
| HRV-54 |
F01-3774 |
VP4+VP2(p) |
420 |
AF343612 |
Savolainen et al., 2002 |
|
|
VP1 |
858 |
AY355235 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1358
|
AY450492
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436652 |
Savolainen et al., unpublished |
|
Human rhinovirus 55 (HRV-55) |
| HRV-55 |
Wis315E (Wisconsin/64) |
CG |
7036 |
DQ473511 |
Kistler et al., 2007 |
Missing part of 5' UTR |
| VP4+VP2(p) |
420 |
AF343621 |
Savolainen et al., 2002 |
|
|
VP1 |
861 |
AY355236 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1351
|
AY450493 |
Laine et al., unpub. |
|
| 3D(p) |
380 |
AY436663 |
Savolainen et al., unpublished |
|
Human rhinovirus 56 (HRV-56) |
| HRV-56 |
CH82
[V-151-011-021] |
CG |
7136 |
FJ445140 |
Palmenberg
et al., 2009 |
|
| 5'UTR(p) |
255 |
Z29661 |
Mori and Clewley, 1994 |
|
| VP4+VP2(p) |
420 |
AF343610 |
Savolainen et al., 2002 |
|
|
VP1 |
858 |
AY355237 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1371
|
AY450494
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436657 |
Savolainen et al., unpublished |
|
| HRV-56 |
unnamed |
CG |
7071 |
EU840727 |
Tapparel et al., 2009 |
|
Human rhinovirus 57 (HRV-57) |
| HRV-57 |
CH47 |
VP4+VP2(p) |
420 |
AF343622 |
Savolainen et al., 2002 |
|
|
VP1 |
864 |
AY355238 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1381
|
AY450495
|
Laine et al., unpub. |
|
Human rhinovirus 58 (HRV-58) |
| HRV-58 |
21-CV20 |
VP2(p) |
336 |
Z47570 |
Horsnell et al.,
1995 |
|
| VP4+VP2(p) |
420 |
AY040236 |
Savolainen et al., 2002 |
|
|
VP1 |
870 |
AY355239 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1338
|
AY450496
|
Laine et al., unpub. |
|
Human rhinovirus 59 (HRV-59) |
| HRV-59 |
611-CV35 |
CG |
7135 |
DQ473500 |
Kistler et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343611 |
Savolainen et al., 2002 |
|
|
VP1 |
858 |
AY355240 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1365
|
AY450497
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436664 |
Savolainen et al., unpublished |
|
Human rhinovirus 60 (HRV-60) |
| HRV-60 |
2268-CV37 |
VP4+VP2(p) |
420 |
AF343627 |
Savolainen et al., 2002 |
|
|
VP1 |
870 |
AY355241 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1425
|
AY450498
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436653 |
Savolainen et al., unpublished |
|
Human rhinovirus 61 (HRV-61) |
| HRV-61 |
6669-CV39 |
VP4+VP2(p) |
420 |
AF343601 |
Savolainen et al., 2002 |
|
|
VP1 |
876 |
AY355242 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1393
|
AY450499
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436671 |
Savolainen et al., unpublished |
|
Human rhinovirus 62 (HRV-62) |
| HRV-62 |
1963M-CV40 |
VP2(p) |
336 |
Z47571 |
Horsnell et al.,
1995 |
|
| VP4+VP2(p) |
420 |
AF343618 |
Savolainen et al., 2002 |
|
| VP1 |
846 |
AY273204 |
Vlasak et al.,
2003 |
|
| VP3(p)+VP1+2A(p) |
1361 |
AY458611 |
Laine et al.,
unpublished |
|
|
VP1 |
846 |
AY355243 |
Ledford et al.,
unpub. |
|
| 3D(p) |
468 |
AY436660 |
Savolainen et al., unpublished |
|
Human rhinovirus 63 (HRV-63) |
| HRV-63 |
6360-CV 41 |
5'UTR(p) |
259 |
Z29662 |
Mori and Clewley, 1994 |
|
| VP4+VP2(p) |
420 |
AF343636 |
Savolainen et al., 2002 |
|
|
VP1 |
858 |
AY355244 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1392
|
AY450500
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436658 |
Savolainen et al., unpublished |
|
Human rhinovirus 64 (HRV-64) |
| HRV-64 |
6258-CV44 |
CG |
7129 |
EF173417 |
Tapparel et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343629 |
Savolainen et al., 2002 |
|
|
VP1 |
867 |
AY355245 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1381
|
AY450501
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436667 |
Savolainen et al., unpublished |
|
Human rhinovirus 65 (HRV-65) |
| HRV-65 |
425-CV47 |
VP2(p) |
336 |
Z47572 |
Horsnell et al.,
1995 |
|
| VP4+VP2(p) |
420 |
AF343586 |
Savolainen et al., 2002 |
|
|
VP1 |
888 |
AY355246 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1341
|
AY450502
|
Laine et al., unpub. |
|
Human rhinovirus 66 (HRV-66) |
| HRV-66 |
1983-CV48 |
VP4+VP2(p) |
384 |
AF343640 |
Savolainen et al., 2002 |
|
|
VP1 |
864 |
AY355247 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1405
|
AY450503
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436655 |
Savolainen et al., unpublished |
|
Human rhinovirus 67 (HRV-67) |
| HRV-67 |
1857-CV51 |
VP4+VP2(p) |
420 |
AF343603 |
Savolainen et al., 2002 |
|
|
VP1 |
867 |
AY355248 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1315
|
AY450504
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436672 |
Savolainen et al., unpublished |
|
Human rhinovirus 68 (HRV-68) |
| HRV-68 |
F02-2317 Wood |
VP4+VP2(p) |
420 |
AF343591 |
Savolainen et al., 2002 |
|
|
VP1 |
891 |
AY355249 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1363
|
AY450505
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436679 |
Savolainen et al., unpublished |
|
Human rhinovirus 71 (HRV-71) |
| HRV-71 |
SF365 |
VP4+VP2(p) |
420 |
AF343587 |
Savolainen et al., 2002 |
|
|
VP1 |
885 |
AY355252 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1381
|
AY450506
|
Laine et al., unpub. |
|
Human rhinovirus 73 (HRV-73) |
| HRV-73 |
107E |
CG |
7140 |
DQ473492 |
Kistler et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343602 |
Savolainen et al., 2002 |
|
|
VP1 |
870 |
AY355254 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1395
|
AY450507
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436668 |
Savolainen et al., unpublished |
|
Human rhinovirus 74 (HRV-74) |
| HRV-74 |
328A |
CG |
7120 |
DQ473494 |
Kistler et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343631 |
Savolainen et al., 2002 |
|
|
VP1 |
861 |
AY355255 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1384
|
AY450508
|
Laine et al., unpub. |
|
Human rhinovirus 75 (HRV-75) |
| HRV-75 |
328F |
CG |
7137 |
DQ473510 |
Kistler et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343639 |
Savolainen et al., 2002 |
|
|
VP1 |
867 |
AY355256 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1397
|
AY450509
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436670 |
Savolainen et al., unpublished |
|
Human rhinovirus 76 (HRV-76) |
| HRV-76 |
H00062 |
CG |
7129 |
DQ473502 |
Kistler et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343624 |
Savolainen et al., 2002 |
|
|
VP1 |
858 |
AY355257 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1372
|
AY450510
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436661 |
Savolainen et al., unpublished |
|
Human rhinovirus 77 (HRV-77) |
| HRV-77 |
130-63 |
VP4+VP2(p) |
420 |
AF343608 |
Savolainen et al., 2002 |
|
|
VP1 |
864 |
AY355258 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1382
|
AY450511
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436650 |
Savolainen et al., unpublished |
|
Human rhinovirus 78 (HRV-78) |
| HRV-78 |
2030-65 |
CG |
7145 |
EF173418 |
Tapparel et al., 2007 |
|
| VP4+VP2(p) |
420 |
AY016408 |
Savolainen et al., 2002 |
|
|
VP1 |
861 |
AY355259 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1365
|
AY450512
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436647 |
Savolainen et al., unpublished |
|
Human rhinovirus 80 (HRV-80) |
| HRV-80 |
277G |
VP4+VP2(p) |
420 |
AF343593 |
Savolainen et al., 2002 |
|
|
VP1 |
876 |
AY355261 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1408
|
AY450514
|
Laine et al., unpub. |
|
Human rhinovirus 81 (HRV-81) |
| HRV-81 |
483F2 |
VP4+VP2(p) |
420 |
AF343606 |
Savolainen et al., 2002 |
|
|
VP1 |
855 |
AY355262 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1366
|
AY450515
|
Laine et al., unpub. |
|
Human rhinovirus 82 (HRV-82) |
| HRV-82 |
03647 |
VP4+VP2(p) |
420 |
AY040233 |
Savolainen et al., 2002 |
|
|
VP1 |
867 |
AY355263 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1382
|
AY450516
|
Laine et al., unpub. |
|
| HRV-82 |
Santa Cruz, CA |
CG |
7129 |
DQ473509 |
Kistler et al., 2007 |
|
Human rhinovirus 85 (HRV-85) |
| HRV-85 |
50-525-CV54 |
CG |
7140 |
download |
G. Stanway et al.,
unpub. |
|
| VP4+VP2(p) |
420 |
AF343642 |
Savolainen et al., 2002 |
|
|
VP1 |
858 |
AY355266 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1373
|
AY450517
|
Laine et al., unpub. |
|
Human rhinovirus 88 (HRV-88) |
| HRV-88
|
CVD 01-0165-Dambrauskas |
CG |
7143 |
DQ473504 |
Kistler et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343590 |
Savolainen et al., 2002 |
|
|
VP1 |
870 |
AY355269 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1411
|
AY450518
|
Laine et al., unpub. |
|
Human rhinovirus 89 (HRV-89) |
| HRV-89 |
41467-Gallo |
CG |
7152 |
M16248 |
Duechler et al.,
1987 |
|
|
VP1 |
876 |
AY355270 |
Ledford et al.,
unpub. |
|
| 3D(p) |
468 |
AY436675 |
Savolainen et al., unpublished |
|
Human rhinovirus 90 (HRV-90) |
| HRV-90 |
K2305 |
VP4+VP2(p) |
420 |
AF343620 |
Savolainen et al., 2002 |
|
|
VP1 |
855 |
AY355271 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1360
|
AY450520
|
Laine et al., unpub. |
|
Human rhinovirus 94 (HRV-94) |
| HRV-94 |
SF-1803 |
CG |
7132 |
EF173419 |
Tapparel et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343638 |
Savolainen et al., 2002 |
|
|
VP1 |
867 |
AY355275 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1389
|
AY450521
|
Laine et al., unpub. |
|
Human rhinovirus 95 (HRV-95) |
| HRV-95 |
SF-998 |
VP4+VP2(p) |
420 |
AF343595 |
Savolainen et al., 2002 |
|
|
VP1 |
852 |
AY355276 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1377
|
AY450522
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436683 |
Savolainen et al., unpublished |
|
Human rhinovirus 96 (HRV-96) |
| HRV-96 |
SF-1426 |
VP4+VP2(p) |
420 |
AF343604 |
Savolainen et al., 2002 |
|
|
VP1 |
867 |
AY355277 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1356
|
AY450523
|
Laine et al., unpub. |
|
Human rhinovirus 98 (HRV-98) |
| HRV-98 |
SF-4006 |
VP4+VP2(p) |
420 |
AF343613 |
Savolainen et al., 2002 |
|
|
VP1 |
858 |
AY355279 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1388
|
AY450524
|
Laine et al., unpub. |
|
Human rhinovirus 100 (HRV-100) |
| HRV-100 |
K6579 |
VP4+VP2(p) |
420 |
AF343643 |
Savolainen et al., 2002 |
|
|
VP1 |
864 |
AY355281 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1376
|
AY450463
|
Laine et al., unpub. |
|
| 3D(p) |
434 |
AY436662 |
Savolainen et al., unpublished |
|
Untyped isolates |
| HRV-A sp. |
OK88-8162 |
VP1(p) |
301 |
AF152281 |
Oberste et al.,
2000 |
Note: 89.4% match with
HRV-31 |
| HRV-A sp. |
NY-026 (1029) |
VP4 |
201 |
DQ875920 |
Lamson et al., 2006 |
|
| HRV-A sp. |
NY-039 (1042) |
VP4 |
201 |
DQ875923 |
Lamson et al., 2006 |
|
| HRV-A |
N13 (China 2007) |
CG |
7136 |
GQ223229 |
Huang et al., 2009 |
|
| HRV-A |
AMS323 (Netherlands) |
CG |
7160 |
EF155421 |
de Vries et al., 2008 |
|
| |
|
|
|
|
|
|
CG = complete genome
(p) = partial gene
sequence |
References
|
|