| |
Genus: Enterovirus
Species: Human rhinovirus C
The proposal for the designation of HRV-C types 1-33 has
been published (Simmonds
et al., 2010).
| Serotype: human rhinovirus C1 (HRV-C1) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C2 (HRV-C2) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C3 (HRV-C3) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C4 (HRV-C4) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C5 (HRV-C5) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C6 (HRV-C6) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C7 (HRV-C7) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C8 (HRV-C8) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C9 (HRV-C9) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C10 (HRV-C10) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C11 (HRV-C11) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C12 (HRV-C12) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C13 (HRV-C13) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C14 (HRV-C14) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C15 (HRV-C15) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C16 (HRV-C16) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C17 (HRV-C17) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C18 (HRV-C18) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C19 (HRV-C19) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C20 (HRV-C20) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C21 (HRV-C21) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C22 (HRV-C22) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C23 (HRV-C23) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C24 (HRV-C24) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C25 (HRV-C25) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C26 (HRV-C26) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C27 (HRV-C27) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C28 (HRV-C28) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C29 (HRV-C29) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C30 (HRV-C30) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C31 (HRV-C31) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C32 (HRV-C32) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C33 (HRV-C33) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C34 (HRV-C34) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C35 (HRV-C35) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C36 (HRV-C36) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C37 (HRV-C37) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C38 (HRV-C38) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C39 (HRV-C39) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C40 (HRV-C40) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C41 (HRV-C41) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C42 (HRV-C42) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C43 (HRV-C43) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C44 (HRV-C44) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C45 (HRV-C45) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C46 (HRV-C46) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C47 (HRV-C47) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C48 (HRV-C48) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: human rhinovirus C49 (HRV-C49) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| |
|
|
(White areas indicate genes which haven't yet been
sequenced completely; grey areas are where only partial sequences
exist)
References
| Virus |
Strain |
Region |
Length |
Accession
No. |
Reference |
Comments |
Human rhinovirus C1 (HRV-C1) |
| HRV-C1 |
NAT001* |
CG |
6944 |
EF077279 |
Kistler
et al., 2007 |
bases missing from 5' end |
Human rhinovirus C2 (HRV-C2) |
| HRV-C2 |
NAT045* |
CG |
7015 |
EF077280 |
Kistler
et al., 2007 |
bases missing from 5' end |
Human rhinovirus C3 (HRV-C3) |
| HRV-C3 |
QPM* |
CG |
6948 |
EF186077 |
McErlean et al., 2007 |
~200 nt missing
from 5' end |
Human rhinovirus C4 (HRV-C4) |
| HRV-C4 |
024* |
CG |
7099 |
EF582385 |
Lau et al., 2007 |
Hong Kong |
Human rhinovirus C5 (HRV-C5) |
| HRV-C5 |
025* |
CG |
7114 |
EF582386 |
Lau et al., 2007 |
Hong Kong |
Human rhinovirus C6 (HRV-C6) |
| HRV-C6 |
026* |
CG |
7086 |
EF582387 |
Lau et al., 2007 |
Hong Kong |
Human rhinovirus C7 (HRV-C7) |
| HRV-C7 |
NY-074
(1078)* |
CG |
7072 |
DQ875932 |
Lamson et al., 2006;
Briese et al., unpub. |
|
Human rhinovirus C8 (HRV-C8) |
| HRV-C8 |
N4* |
CG |
7107 |
GQ223227 |
Huang et al., 2009 |
China
2006 |
Human rhinovirus C9 (HRV-C9) |
| HRV-C9 |
N10* |
CG |
7111 |
GQ223228 |
Huang et al., 2009 |
China
2007 |
Human rhinovirus C10 (HRV-C10) |
| HRV-C10 |
QCE* |
CG |
7010 |
GQ323774 |
Arden et al., unpub. |
Aus,
2003 |
| HRV-C10 |
|
VP1 |
831 |
EU935600 |
Faux et al., unpub. |
|
Human rhinovirus C11 (HRV-C11) |
| HRV-C11 |
CL-170085* |
CG |
7108 |
EU840952 |
Tapparel et al., 2009a,b |
Swi-2008 |
| HRV-C11 |
|
VP1 |
775 |
FJ392317 |
Tapparel et al., 2009b |
|
Human rhinovirus C12 (HRV-C12) |
| HRV-C12 |
Resp_3922/07* |
VP1 |
|
HM236958 |
McIntyre et al., 2010 |
|
| HRV-C12 |
|
VP4(p)/VP2(p) |
|
EF077264 |
Kistler
et al., 2007 |
|
Human rhinovirus C13 (HRV-C13) |
| HRV-C13 |
Resp_2951/06* |
VP1 |
|
HM236908 |
McIntyre et
al., 2010 |
|
| HRV-C13 |
|
VP4(p)/VP2(p) |
|
EU081795 |
Renwick et al.,
2007 |
|
Human rhinovirus C14 (HRV-C14) |
| HRV-C14 |
Resp_3090/06* |
VP1 |
|
HM236911 |
McIntyre et
al., 2010 |
|
| HRV-C14 |
|
VP4(p)/VP2(p) |
|
EU081796 |
Renwick et al.,
2007 |
|
Human rhinovirus C15 (HRV-C15) |
| HRV-C15 |
Resp_4644/07* |
VP1 |
|
HM236963 |
McIntyre et
al., 2010 |
|
|
HRV-C15 |
|
VP4(p)/VP2(p) |
|
EU081800 |
Renwick et al.,
2007 |
|
| HRV-C15 |
W10 |
CG |
7119 |
GU219984 |
Rathe et al., unpub. |
|
Human rhinovirus C16 (HRV-C16) |
| HRV-C16 |
Resp_5910/07* |
VP1 |
|
HM236944 |
McIntyre et
al., 2010 |
|
|
HRV-C16 |
|
VP4(p)/VP2(p) |
|
EU081808 |
Renwick et al.,
2007 |
|
Human rhinovirus C17 (HRV-C17) |
| HRV-C17 |
Resp_5145/07* |
VP1 |
|
HM236936 |
McIntyre et
al., 2010 |
|
| HRV-C17 |
|
VP4(p)/VP2(p) |
|
EU081809 |
Renwick et al.,
2007 |
|
Human rhinovirus C18 (HRV-C18) |
| HRV-C18 |
Resp_3631/07* |
VP1 |
|
HM236918 |
McIntyre et
al., 2010 |
|
| HRV-C18 |
|
VP4(p)/VP2(p) |
|
EU590074 |
Savolainen-Kopra
et al., 2009a |
|
Human rhinovirus C19 (HRV-C19) |
| HRV-C19 |
CL-Fnp5* |
P1 |
3055 |
EU840728 |
Tapparel et al., 2009a |
Swi, 2003 |
| HRV-C19 |
|
VP4(p)/VP2(p) |
|
EU697850 |
Briese et al.,
2008 |
|
Human rhinovirus C20 (HRV-C20) |
| HRV-C20 |
Resp_3995/07* |
VP1 |
|
HM236923 |
McIntyre et
al., 2010 |
|
| HRV-C20 |
|
VP4(p)/VP2(p) |
|
EU697851 |
Briese et al.,
2008 |
|
Human rhinovirus C21 (HRV-C21) |
| HRV-C21 |
Resp_5071/07* |
VP1 |
|
HM236903 |
McIntyre et
al., 2010 |
|
| HRV-C21 |
|
VP4(p)/VP2(p) |
|
EU752377 |
Miller et al.,
2009a |
|
Human rhinovirus C22 (HRV-C22) |
| HRV-C22 |
Resp_2748/06* |
VP1 |
|
HM236905 |
McIntyre et
al., 2010 |
|
| HRV-C22 |
|
VP4(p)/VP2(p) |
|
EU752381 |
Miller et al.,
2009a |
|
Human rhinovirus C23 (HRV-C23) |
| HRV-C23 |
Resp_3053/06* |
VP1 |
|
HM236901 |
McIntyre et
al., 2010 |
|
| HRV-C23 |
|
VP4(p)/VP2(p) |
|
EU752424 |
Miller et al.,
2009a |
|
Human rhinovirus C24 (HRV-C24) |
| HRV-C24 |
Resp_7147/07* |
VP1 |
|
HM236939 |
McIntyre et
al., 2010 |
|
| HRV-C24 |
|
VP4(p)/VP2(p) |
|
EU752426 |
Miller et al.,
2009a |
|
Human rhinovirus C25 (HRV-C25) |
| HRV-C25 |
Resp_2832/06* |
VP1 |
|
HM236952 |
McIntyre et
al., 2010 |
|
| HRV-C25 |
|
VP4(p)/VP2(p) |
|
EU752427 |
Miller et al.,
2009a |
|
| HRV-C25 |
LZ269 |
CG |
7139 |
JF317013 |
Yan et al.,
unpub. |
China: Feb-2007 |
Human rhinovirus C26 (HRV-C26) |
| HRV-C26 |
Resp_2514/06* |
VP1 |
|
HM236904 |
McIntyre et
al., 2010 |
|
| HRV-C26 |
|
VP4(p)/VP2(p) |
|
EU752441 |
Miller et al.,
2009a |
|
Human rhinovirus C27 (HRV-C27) |
| HRV-C27 |
Resp_2784/06* |
VP1 |
|
HM236906 |
McIntyre et
al., 2010 |
|
| HRV-C27 |
|
VP4(p)/VP2(p) |
|
GQ223122 |
Huang et al.,
2009 |
|
Human rhinovirus C28 (HRV-C28) |
| HRV-C28 |
Resp_3105/06* |
VP1 |
|
HM236954 |
McIntyre et
al., 2010 |
|
| HRV-C28 |
|
VP4(p)/VP2(p) |
|
GQ223134 |
Huang et al.,
2009 |
|
Human rhinovirus C29 (HRV-C29) |
| HRV-C29 |
Resp_5345/07* |
VP1 |
|
HM236949 |
McIntyre et
al., 2010 |
|
|
HRV-C29 |
|
VP4(p)/VP2(p) |
|
FJ615699 |
Miller et al., 2009b |
|
Human rhinovirus C30 (HRV-C30) |
| HRV-C30 |
Resp_3898/07* |
VP1 |
|
HM236968 |
McIntyre et al., 2010 |
|
|
HRV-C30 |
|
VP4(p)/VP2(p) |
|
GQ476669 |
Wisdom et al., 2009b |
|
Human rhinovirus C31 (HRV-C31) |
| HRV-C31 |
Resp_4923/07* |
VP1 |
|
HM236964 |
McIntyre et al., 2010 |
|
| HRV-C31 |
|
VP4(p)/VP2(p) |
|
GU294380 |
Wisdom et al.,
2009b |
|
Human rhinovirus C32 (HRV-C32) |
| HRV-C32 |
Resp_6131/07* |
VP1 |
|
HM236897 |
McIntyre et
al., 2010 |
|
| HRV-C32 |
|
VP4(p)/VP2(p) |
|
GU294466 |
Wisdom et al.,
2009b |
|
Human rhinovirus C33 (HRV-C33) |
| HRV-C33 |
Resp_4917/07* |
VP1 |
|
HM236934 |
McIntyre et
al., 2010 |
|
|
HRV-C33 |
|
VP4(p)/VP2(p) |
|
GU294480 |
Wisdom et al.,
2009b |
|
Human rhinovirus C34 (HRV-C34) |
|
HRV-C34 |
pico58* |
nearly CG |
|
n/a |
A.M. Lindberg
et al., unpub. |
|
Human rhinovirus C35 (HRV-C35) |
|
HRV-C35 |
lrti_hrvc1* |
nearly CG |
|
n/a |
F. Lysholm et
al., unpub. |
|
Human rhinovirus C36 (HRV-C36) |
|
HRV-C36 |
|
|
|
|
|
|
Human rhinovirus C37 (HRV-C37) |
|
HRV-C37 |
|
|
|
|
|
|
Human rhinovirus C38 (HRV-C38) |
|
HRV-C38 |
|
|
|
|
|
|
Human rhinovirus C39 (HRV-C39) |
|
HRV-C39 |
|
|
|
|
|
|
Human rhinovirus C40 (HRV-C40) |
|
HRV-C40 |
|
|
|
|
|
|
Human rhinovirus C41 (HRV-C41) |
|
HRV-C41 |
|
|
|
|
|
|
Human rhinovirus C42 (HRV-C42) |
|
HRV-C42 |
|
|
|
|
|
|
Human rhinovirus C43 (HRV-C43) |
|
HRV-C43 |
|
|
|
|
|
|
Human rhinovirus C44 (HRV-C44) |
|
HRV-C44 |
|
|
|
|
|
|
Human rhinovirus C45 (HRV-C45) |
|
HRV-C45 |
|
|
|
|
|
|
Human rhinovirus C46 (HRV-C46) |
|
HRV-C46 |
|
|
|
|
|
|
Human rhinovirus C47 (HRV-C47) |
|
HRV-C47 |
|
|
|
|
|
|
Human rhinovirus C48 (HRV-C48) |
|
HRV-C48 |
|
|
|
|
|
|
Human rhinovirus C49 (HRV-C49) |
|
HRV-C49 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
waiting to be placed in the above table... |
| Virus |
Strain |
Region |
Length |
Accession No. |
Reference |
Comments |
|
HRV-? |
QPM-001 |
VP4 |
198 |
EF512632 |
McErlean et al., 2007 |
|
|
VP2 |
790 |
EF512649 |
McErlean et al., 2007 |
|
|
VP1 |
825 |
EF512666 |
McErlean et al., 2007 |
|
|
HRV-? |
QPM-002 |
VP4 |
198 |
EF512633 |
McErlean et al., 2007 |
|
|
VP2 |
790 |
EF512663 |
McErlean et al., 2007 |
|
|
VP1 |
825 |
EF512667 |
McErlean et al., 2007 |
|
|
HRV-? |
QPM-003 |
VP4 |
198 |
EF512639 |
McErlean et al., 2007 |
|
|
VP2 |
790 |
EF512655 |
McErlean et al., 2007 |
|
|
VP1 |
825 |
EF512678 |
McErlean et al., 2007 |
|
|
HRV-? |
QPM-004 |
VP4 |
198 |
EF512643 |
McErlean et al., 2007 |
|
|
VP2 |
790 |
EF512653 |
McErlean et al., 2007 |
|
|
VP1 |
825 |
EF512670 |
McErlean et al., 2007 |
|
|
HRV-? |
QPM-005 |
VP4 |
198 |
EF512642 |
McErlean et al., 2007 |
|
|
VP2 |
790 |
EF512665 |
McErlean et al., 2007 |
|
|
VP1 |
825 |
EF512668 |
McErlean et al., 2007 |
|
|
HRV-? |
QPM-006 |
VP4 |
198 |
EF512644 |
McErlean et al., 2007 |
|
|
VP2 |
790 |
EF512654 |
McErlean et al., 2007 |
|
|
VP1 |
825 |
EF512673 |
McErlean et al., 2007 |
|
|
HRV-? |
QPM-007 |
VP4 |
198 |
EF512634 |
McErlean et al., 2007 |
|
|
VP2 |
790 |
EF512657 |
McErlean et al., 2007 |
|
|
VP1 |
825 |
EF512669 |
McErlean et al., 2007 |
|
|
HRV-? |
QPM-008 |
VP4 |
198 |
EF512636 |
McErlean et al., 2007 |
|
|
VP2 |
790 |
EF512652 |
McErlean et al., 2007 |
|
|
VP1 |
825 |
EF512680 |
McErlean et al., 2007 |
|
|
HRV-? |
QPM-009 |
VP4 |
198 |
EF512648 |
McErlean et al., 2007 |
|
|
VP2 |
790 |
EF512664 |
McErlean et al., 2007 |
|
|
VP1 |
825 |
EF512682 |
McErlean et al., 2007 |
|
|
HRV-? |
QPM-010 |
VP4 |
198 |
EF512646 |
McErlean et al., 2007 |
|
|
VP2 |
790 |
EF512659 |
McErlean et al., 2007 |
|
|
VP1 |
825 |
EF512672 |
McErlean et al., 2007 |
|
|
HRV-? |
QPM-011 |
VP4 |
198 |
EF512637 |
McErlean et al., 2007 |
|
|
VP2 |
790 |
EF512650 |
McErlean et al., 2007 |
|
|
VP1 |
825 |
EF512671 |
McErlean et al., 2007 |
|
|
HRV-? |
QPM-012 |
VP4 |
198 |
EF512641 |
McErlean et al., 2007 |
|
|
VP2 |
790 |
EF512651 |
McErlean et al., 2007 |
|
|
VP1 |
825 |
EF512675 |
McErlean et al., 2007 |
|
|
HRV-? |
QPM-013 |
VP4 |
198 |
EF512640 |
McErlean et al., 2007 |
|
|
VP2 |
790 |
EF512656 |
McErlean et al., 2007 |
|
|
VP1 |
825 |
EF512679 |
McErlean et al., 2007 |
|
|
HRV-? |
QPM-014 |
VP4 |
198 |
EF512647 |
McErlean et al., 2007 |
|
|
VP2 |
790 |
EF512660 |
McErlean et al., 2007 |
|
|
VP1 |
825 |
EF512681 |
McErlean et al., 2007 |
|
|
HRV-? |
QPM-015 |
VP4 |
198 |
EF512645 |
McErlean et al., 2007 |
|
|
VP2 |
790 |
EF512662 |
McErlean et al., 2007 |
|
|
VP1 |
825 |
EF512674 |
McErlean et al., 2007 |
|
|
HRV-? |
QPM-016 |
VP4 |
198 |
EF512635 |
McErlean et al., 2007 |
|
|
VP2 |
790 |
EF512658 |
McErlean et al., 2007 |
|
|
VP1 |
825 |
EF512677 |
McErlean et al., 2007 |
|
|
HRV-? |
QPM-17 |
VP4 |
198 |
EF512638 |
McErlean et al., 2007 |
|
|
VP2 |
790 |
EF512661 |
McErlean et al., 2007 |
|
|
VP1 |
825 |
EF512676 |
McErlean et al., 2007 |
|
| HRV-? |
NY-041 (1044) |
VP4 |
201 |
DQ875921 |
Lamson et al., 2006 |
|
| HRV-? |
NY-063 (1067) |
VP4 |
201 |
DQ875924 |
Lamson et al., 2006 |
|
| HRV-? |
NY-1085 (2005) |
VP4 |
201 |
DQ875925 |
Lamson et al., 2006 |
|
| HRV-? |
NY-042 (1045) |
VP4 |
201 |
DQ875926 |
Lamson et al., 2006 |
|
| HRV-? |
NY-060 (1064) |
VP4 |
201 |
DQ875928 |
Lamson et al., 2006 |
|
| HRV-? |
NY-003 (1003) |
VP4 |
201 |
DQ875929 |
Lamson et al., 2006 |
|
| HRV-? |
NY-028 (1031) |
VP4 |
201 |
DQ875931 |
Lamson et al., 2006 |
|
| HRV-? |
NAT009 |
VP4/VP2(p) |
|
EF077237 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT018 |
VP4/VP2(p) |
|
EF077238 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT051 |
VP4/VP2(p) |
|
EF077239 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT028 |
VP4/VP2(p) |
|
EF077240 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT021 |
VP4/VP2(p) |
|
EF077241 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT038 |
VP4/VP2(p) |
|
EF077242 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT040 |
VP4/VP2(p) |
|
EF077243 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT046 |
VP4/VP2(p) |
|
EF077244 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT053 |
VP4/VP2(p) |
|
EF077245 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT047 |
VP4/VP2(p) |
|
EF077246 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT049 |
VP4/VP2(p) |
|
EF077247 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT025 |
VP4/VP2(p) |
|
EF077248 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT026 |
VP4/VP2(p) |
|
EF077249 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT008 |
VP4/VP2(p) |
|
EF077250 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT023 |
VP4/VP2(p) |
|
EF077251 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT001 |
VP4/VP2(p) |
|
EF077252 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT045 |
VP4/VP2(p) |
|
EF077253 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT063 |
VP4/VP2(p) |
|
EF077254 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT065 |
VP4/VP2(p) |
|
EF077255 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT069 |
VP4/VP2(p) |
|
EF077256 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT080 |
VP4/VP2(p) |
|
EF077257 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT087 |
VP4/VP2(p) |
|
EF077258 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT088 |
VP4/VP2(p) |
|
EF077259 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT059 |
VP4/VP2(p) |
|
EF077260 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT060 |
VP4/VP2(p) |
|
EF077261 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT066 |
VP4/VP2(p) |
|
EF077262 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT070 |
VP4/VP2(p) |
|
EF077263 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT083 |
VP4/VP2(p) |
|
EF077264 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT084 |
VP4/VP2(p) |
|
EF077265 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT057 |
VP4/VP2(p) |
|
EF077266 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT061 |
VP4/VP2(p) |
|
EF077267 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT062 |
VP4/VP2(p) |
|
EF077268 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT089 |
VP4/VP2(p) |
|
EF077269 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT024 |
VP4/VP2(p) |
446 |
EF077270 |
Kistler
et al., 2007 |
|
| HRV-? |
NAT037 |
VP4/VP2(p) |
561 |
EF077281 |
Kistler
et al., 2007 |
|
| HRV-? |
026-001 (Aus, 2002) |
VP1 |
825 |
EU935601 |
Faux et al., unpub. |
|
| HRV-? |
QIM-001 |
VP1(p) |
714 |
FJ770372 |
Faux & Mackay, unpub. |
|
| |
|
|
|
|
|
|
CG = complete
genome
(p) = partial gene sequence |
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