| |
Genus: Enterovirus
Species: Porcine enterovirus
| Serotype: Porcine enterovirus 9 (PEV-9) |
|
| 5' UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
|
Serotype: Porcine enterovirus 10 (PEV-10) |
|
| 5' UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
| |
|
|
(White areas indicate genes which haven't yet been
sequenced completely;
grey areas are where only partial sequences exist)
References
| Virus |
Strain |
Region |
Length
|
Accession No. |
Reference |
Comments |
Porcine enterovirus 9 (PEV-9)
|
| PEV-9 |
UKG/410/73* (Scotland/73) |
CG |
7351 |
Y14459 |
J. Peng et al., unpub. |
~16 nt missing from 5' end |
| CG |
7388 |
AF363453 |
Krumbholz et al., 2002 |
|
| PEV-9 |
UKG/216/80 |
5' UTR+VP4(p) |
1231 |
AF363454 |
Krumbholz et al., 2002 |
nt 1-1012 |
| 3D(p) |
nt 1013-1231 |
| PEV-9 |
ITA92-915BE915 |
5' UTR(p) |
570 |
AJ295169 |
Muscillo et al., unpub. |
|
| VP4(p)+VP2(p) |
401 |
AJ295170 |
Muscillo et al., unpub. |
|
| PEV-9 |
ITA93-766BE93 |
5'
UTR(p) |
115 |
AJ295168 |
Muscillo et al.,
unpub. |
|
| PEV-9 |
Swine/IT/142/1993 |
VP1(p) |
280 |
AM261009 |
La Rosa et al., 2006 |
|
| PEV-9 |
Swine/IT/312/1997 |
VP1(p) |
269 |
AM261018 |
La Rosa et al., 2006 |
|
| PEV-9 |
T25/Porcine EV
9/Taipei/2005 |
5'
UTR(p) |
388 |
DQ249291 |
Chen et al.,
unpub. |
|
| PEV-9 |
T41/Porcine EV
9/Taipei/2005 |
5'
UTR(p) |
255 |
DQ249292 |
Chen et al.,
unpub. |
|
| PEV-9 |
HME-188 (surface
water, Taiwan) |
5'
UTR(p) |
303 |
DQ888219 |
Chen and Wan, unpub. |
|
| PEV-9 |
HME-200 (surface
water, Taiwan) |
5'
UTR(p) |
303 |
DQ888220 |
Chen and Wan, unpub. |
|
| PEV-9 |
HME-293 (recreation
water, Taiwan) |
5'
UTR(p) |
303 |
DQ888221 |
Chen and Wan, unpub. |
|
Porcine enterovirus 10 (PEV-10)
|
| PEV-10 |
LP54/England/75* |
5' UTR(p) |
274 |
AJ250675 |
Lin et al., 2000 |
|
|
VP2(p) |
162
|
AB049562 |
Kaku et al., 2001 |
|
|
3D(p) |
855 |
AB049544 |
Kaku et al., 2001 |
|
|
CG |
7401 |
AF363455 |
Krumbholz et al., 2002 |
|
|
PEV-10? |
W47H (J10) |
3D(p) |
771 |
AB049545 |
Kaku et al., 2001 |
|
| PEV-10 |
Swine/IT/285/1995 |
VP1(p) |
262 |
AM261010 |
La Rosa et al., 2006 |
|
| PEV-10 |
Swine/IT/286/1995 |
VP1(p) |
247 |
AM261011 |
La Rosa et al., 2006 |
|
| PEV-10 |
Swine/IT/295/1995 |
VP1(p) |
272 |
AM261012 |
La Rosa et al., 2006 |
|
| PEV-10 |
Swine/IT/297/1996 |
VP1(p) |
284 |
AM261013 |
La Rosa et al., 2006 |
|
| PEV-10 |
Swine/IT/299/1996 |
VP1(p) |
299 |
AM261014 |
La Rosa et al., 2006 |
|
| PEV-10 |
Swine/IT/302/1996 |
VP1(p) |
270 |
AM261015 |
La Rosa et al., 2006 |
|
| PEV-10 |
Swine/IT/304/1996 |
VP1(p) |
249 |
AM261016 |
La Rosa et al., 2006 |
|
| PEV-10 |
Swine/IT/308/1997 |
VP1(p) |
255 |
AM261017 |
La Rosa et al., 2006 |
|
| PEV-10 |
Swine/IT/314/1997 |
VP1(p) |
363 |
AM261019 |
La Rosa et al., 2006 |
|
| PEV-10 |
Swine/IT/315/1997 |
VP1(p) |
282 |
AM261020 |
La Rosa et al., 2006 |
|
| PEV-10 |
Swine/IT/317/1997 |
VP1(p) |
251 |
AM261021 |
La Rosa et al., 2006 |
|
| PEV-10 |
Swine/IT/318/1997 |
VP1(p) |
272 |
AM261022 |
La Rosa et al., 2006 |
|
CG, complete genome
(p), partial gene sequence
*, prototype strain |
References
Chen, C.H. and Wan, M.T Unpublished. [Bioengineering,
Tatung University, 40 Chungshan N. Rd., Sec. 3, Taipei, 104 886,
Taiwan].
Chen, C.H., Wan, M.T. and Tsai, J.W. Unpublished. [Bioengineening,
Tatung University, 40 Chungshan N. Rd., Sec. 3, Taipei 104 886, Taiwan].
La Rosa, G., Muscillo, M., Di Grazia, A., Fontana, S.,
Iaconelli, M. and Tollis, M. (2006). Validation of rt-PCR assays for
molecular characterization of porcine teschoviruses and enteroviruses.
J. Vet. Med. B Infect. Dis. Vet. Public Health 53: 257-265.
Muscillo, M., La Rosa, G. and Marianelli, C. Unpublished.
[Environmental Hygiene, Istituto Superiore di Sanita', Viale
RL Regina Elena 299, Rome, RM 00161, Italy].
|
