| |
Genus: Parechovirus
Species: Human parechovirus
Type: Human parechovirus 1 (HPeV-1)
(formerly
human echovirus 22) |
|
| 5'
UTR |
VP0 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
Type: Human parechovirus 2 (HPeV-2)
(formerly
human echovirus 23) |
|
| 5'
UTR |
VP0 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Type: Human parechovirus 3 (HPeV-3) |
|
| 5'
UTR |
VP0 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Type: Human parechovirus 4 (HPeV-4) |
|
| 5'
UTR |
VP0 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Type: Human parechovirus 5 (HPeV-5) |
|
| 5'
UTR |
VP0 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Type: Human parechovirus 6 (HPeV-6) |
|
| 5'
UTR |
VP0 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Type: Human parechovirus 7 (HPeV-7) |
|
| 5'
UTR |
VP0 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Type: Human parechovirus 8 (HPeV-8) |
|
| 5'
UTR |
VP0 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Type: Human parechovirus 9 (HPeV-9) |
|
| 5'
UTR |
VP0 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Type: Human parechovirus 10 (HPeV-10) |
|
| 5'
UTR |
VP0 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Type: Human parechovirus 11 (HPeV-11) |
|
| 5'
UTR |
VP0 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Type: Human parechovirus 12 (HPeV-12) |
|
| 5'
UTR |
VP0 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Type: Human parechovirus 13 (HPeV-13) |
|
| 5'
UTR |
VP0 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Type: Human parechovirus 14 (HPeV-14) |
|
| 5'
UTR |
VP0 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
(White areas indicate genes which haven't yet been
sequenced completely;
grey areas are where only partial sequences exist)
| Virus |
Strain |
Region |
Length
|
Accession No. |
Reference |
Comments |
|
|
| HPeV-1 |
Harris (Ohio/56) |
CG |
7339 |
L02971;
S45208 |
Hyypiä et al., 1992 |
|
| HPeV-1 |
Bahrain |
5'UTR(p) |
392 |
AY158064 |
Legay et al., unpub. |
|
|
VP1(p) |
474 |
AY158065 |
Legay et al., unpub. |
|
|
3D(p) |
1378 |
AY158066 |
Legay et al., unpub. |
|
| HPeV-1 |
A942-99 |
P1 |
2317 |
AB112486 |
Ito et al., 2004 |
|
| HPeV-1 |
A1086-99 |
P1 |
2317 |
AB112485 |
Ito et al., 2004 |
|
| HPeV-1 |
A10987-00 |
P1 |
2317 |
AB112487 |
Ito et al., 2004 |
|
|
HPeV-1 |
A298-07 |
VP1 |
693 |
AB469777 |
Ito et al., unpub. |
|
|
HPeV-1 |
A357-07 |
VP1 |
693 |
AB469778 |
Ito et al., unpub. |
|
|
HPeV-1 |
A348-07 |
VP1 |
693 |
AB469779 |
Ito et al., unpub. |
|
|
HPeV-1 |
A436-07 |
VP1 |
693 |
AB469781 |
Ito et al., unpub. |
|
|
HPeV-1 |
A588-07 |
VP1 |
693 |
AB469782 |
Ito et al., unpub. |
|
|
HPeV-1 |
54330 (NL) |
VP1(p) |
617 |
DQ172416 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
450976 (NL) |
VP1(p) |
617 |
DQ172417 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
152212 (NL) |
VP1(p) |
617 |
DQ172418 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
152329 (NL) |
VP1(p) |
617 |
DQ172419 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
152478 (NL) |
VP1(p) |
617 |
DQ172420 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
153231 (NL) |
VP1(p) |
617 |
DQ172421 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
252485 (NL) |
VP1(p) |
617 |
DQ172422 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
350642 (NL) |
VP1(p) |
617 |
DQ172423 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
350918 (NL) |
VP1(p) |
617 |
DQ172424 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
550163 (NL) |
VP1(p) |
617 |
DQ172425 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
151442 (NL) |
VP1(p) |
617 |
DQ172426 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
251949 (NL) |
VP1(p) |
617 |
DQ172427 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
350014 (NL) |
VP1(p) |
617 |
DQ172428 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
350841 (NL) |
VP1(p) |
617 |
DQ172429 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
450343 (NL) |
VP1(p) |
617 |
DQ172430 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
452176 (NL) |
VP1(p) |
617 |
DQ172431 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
152824 (NL) |
VP1(p) |
617 |
DQ172432 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
252228 (NL) |
VP1(p) |
617 |
DQ172433 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
252521 (NL) |
VP1(p) |
617 |
DQ172434 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
452252 (NL) |
VP1(p) |
617 |
DQ172435 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
452712 (NL) |
VP1(p) |
617 |
DQ172436 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
350757 (NL) |
VP1(p) |
617 |
DQ172437 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
152598 (NL) |
VP1(p) |
617 |
DQ172438 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
252581 (NL) |
VP1(p) |
617 |
DQ172439 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
451294 (NL) |
VP1(p) |
617 |
DQ172440 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
452538 (NL) |
VP1(p) |
617 |
DQ172441 |
Benschop et al.,
2006b |
|
|
HPeV-1 |
1999-1096 |
VP1(p) |
617 |
EU077503 |
de Vries et al., 2008 |
|
|
HPeV-1 |
2004-1608 |
VP1(p) |
620 |
EU077515 |
de Vries et al., 2008 |
|
|
HPeV-1 |
2005-938 |
VP1(p) |
545 |
EU077519 |
de Vries et al., 2008 |
|
|
HPeV-1 |
2005-939 |
VP1(p) |
617 |
EU077520 |
de Vries et al., 2008 |
|
|
HPeV-1 |
BNI-788St (Germany:Hamburg) |
CG |
7355 |
EF051629 |
de Souza Luna et al., 2008 |
|
|
HPeV-1 |
BNI-R90/03 (Germany) |
P1 |
2316 |
EU024630 |
de Souza Luna et al., 2008 |
|
|
HPeV-1 |
BNI-R04/03 (Germany) |
VP1 |
693 |
EU024631 |
de Souza Luna et al., 2008 |
|
|
HPeV-1 |
BNI-R09/03 (Germany) |
P1 |
2316 |
EU024632 |
de Souza Luna et al., 2008 |
|
|
HPeV-1 |
BNI-R15/03 (Germany) |
P1 |
2316 |
EU024633 |
de Souza Luna et al., 2008 |
|
|
HPeV-1 |
BNI-R21/03 (Germany) |
P1 |
2316 |
EU024634 |
de Souza Luna et al., 2008 |
|
|
HPeV-1 |
BNI-R30/03 (Germany) |
P1 |
2316 |
EU024635 |
de Souza Luna et al., 2008 |
|
|
HPeV-1 |
BNI-R32/03 (Germany) |
P1 |
2316 |
EU024636 |
de Souza Luna et al., 2008 |
|
|
HPeV-1 |
7555312 (NL, 2003) |
CG |
7380 |
FM178558 |
Zoll et al., 2009 |
|
|
HPeV-1 |
JP-8282 (Japan, 2007) |
VP1 |
758 |
FJ648741 |
Pham et al., unpublished |
|
|
HPeV-1 |
JP-8150 (Japan, 2007) |
VP1 |
738 |
FJ648742 |
Pham et al., unpublished |
|
|
HPeV-1 |
JP-8154 (Japan, 2007) |
VP1 |
717 |
GQ149452 |
Pham et al., unpublished |
|
|
HPeV-1 |
JP-8243 (Japan, 2007) |
VP1 |
743 |
FJ648743 |
Pham et al., unpublished |
|
|
HPeV-1 |
JP-8276 (Japan, 2007) |
VP1 |
718 |
FJ648744 |
Pham et al., unpublished |
|
|
HPeV-1 |
JP-8323 (Japan, 2007) |
VP1 |
718 |
FJ648745 |
Pham et al., unpublished |
|
|
HPeV-1 |
JP-8329 (Japan, 2007) |
VP1 |
718 |
FJ648746 |
Pham et al., unpublished |
|
|
HPeV-1 |
JP-8462 (Japan, 2007) |
VP1 |
743 |
FJ648747 |
Pham et al., unpublished |
|
|
HPeV-1 |
JP-8262 (Japan, 2007) |
VP1 |
725 |
FJ648748 |
Pham et al., unpublished |
|
|
HPeV-1 |
JP-8277 (Japan, 2007) |
VP1 |
731 |
FJ648749 |
Pham et al., unpublished |
|
|
HPeV-1 |
JP-8304 (Japan, 2007) |
VP1 |
732 |
FJ648750 |
Pham et al., unpublished |
|
|
HPeV-1 |
JP-8311 (Japan, 2007) |
VP1 |
734 |
FJ648754 |
Pham et al., unpublished |
|
|
HPeV-1 |
JP-8312 (Japan, 2007) |
VP1 |
733 |
FJ648751 |
Pham et al., unpublished |
|
|
HPeV-1 |
JP-8430 (Japan, 2007) |
VP1 |
732 |
FJ648752 |
Pham et al., unpublished |
|
|
HPeV-1 |
JP-8457 (Japan, 2007) |
VP1 |
733 |
FJ648753 |
Pham et al., unpublished |
|
|
HPeV-1 |
T-69 (Thailand, 2005) |
VP1 |
721 |
FJ648761 |
Pham et al., unpublished |
|
|
HPeV-1 |
T-90 (Thailand, 2005) |
VP1 |
726 |
GQ149453 |
Pham et al., unpublished |
|
|
HPeV-1 |
T-96 (Thailand, 2005) |
VP1 |
713 |
FJ648757 |
Pham et al., unpublished |
|
|
HPeV-1 |
T-103 (Thailand, 2005) |
VP1 |
717 |
FJ648759 |
Pham et al., unpublished |
|
|
HPeV-1 |
T-141 (Thailand, 2005) |
VP1 |
731 |
FJ648762 |
Pham et al., unpublished |
|
|
HPeV-1 |
USA/WI/2004-10907 |
VP1(p) |
693 |
FJ652384 |
Nix et al., unpub. |
|
|
HPeV-1 |
PicoBank/HPeV1/a (Finland, 2000) |
CG |
7296 |
FM242866 |
Williams et al., 2009 |
|
|
HPeV-1 |
SH1 (China, 2008) |
CG |
7314 |
FJ840477 |
Shan et al., 2009 |
|
|
HPeV-1 |
R2594/1990/HUN |
VP0 to 2A |
3038 |
GU125390 |
Boros et al., unpub. |
|
|
HPeV-1 |
R1242/1991/HUN |
VP0 to 2A |
3038 |
GU125391 |
Boros et al., unpub. |
|
|
HPeV-1 |
R1721/1992/HUN |
VP0 to 2A |
3032 |
GU125392 |
Boros et al., unpub. |
|
|
HPeV-1 |
R807/1993/HUN |
VP0 to 2A |
3035 |
GU125393 |
Boros et al., unpub. |
|
|
HPeV-1 |
R485/1993/HUN |
5' UTR(p) |
241 |
GU125394 |
Boros et al., unpub. |
|
|
HPeV-1 |
R3861/1995/HUN |
VP0 to 2A |
3032 |
GU125395 |
Boros et al., unpub. |
|
|
HPeV-1 |
R12454/1998/HUN |
VP0(p)+VP3(p) |
852 |
GU125396 |
Boros et al., unpub. |
|
|
|
| HPeV-2 |
Williamson (Ohio/56) |
VP1 |
690 |
N/A |
Stanway et al., 1994 |
|
| CG |
7329 |
AJ005695 |
Ghazi et al., 1998 |
|
| HPeV-2 |
IT99-5279 (ra/Roma99) |
2A(p)+2B+2C(p) |
441 |
AJ314828 |
Manzara et al.,
2002 |
|
| HPeV2 |
T-144 (Thailand/2005) |
VP1 |
753 |
FJ648760 |
Pham et al., unpublished |
|
|
|
| HPeV-3 |
A308/99 |
CG |
7321 |
AB084913 |
Ito et al., 2004 |
|
| HPeV-3 |
A317-99 |
P1 |
2313 |
AB112482 |
Ito et al., 2004 |
|
| HPeV-3 |
A354-99 |
P1 |
2313 |
AB112483 |
Ito et al., 2004 |
|
| HPeV-3 |
A628-99 |
P1 |
2313 |
AB112484 |
Ito et al., 2004 |
|
| HPeV-3 |
Can82853-01 |
CG |
7322 |
AJ889918 |
Abed and Boivin, 2005 |
|
|
HPeV-3 |
152037 (NL) |
VP1(p) |
611 |
DQ172442 |
Benschop et al.,
2006b |
|
|
HPeV-3 |
251181 (NL) |
VP1(p) |
611 |
DQ172443 |
Benschop et al.,
2006b |
|
|
HPeV-3 |
251360 (NL) |
VP1(p) |
611 |
DQ172444 |
Benschop et al.,
2006b |
|
|
HPeV-3 |
251407 (NL) |
VP1(p) |
611 |
DQ172445 |
Benschop et al.,
2006b |
|
|
HPeV-3 |
450936 (NL) |
VP1(p) |
611 |
DQ172446 |
Benschop et al.,
2006b |
|
|
HPeV-3 |
451517 (NL) |
VP1(p) |
611 |
DQ172447 |
Benschop et al.,
2006b |
|
|
HPeV-3 |
251393 (NL) |
VP1(p) |
611 |
DQ172448 |
Benschop et al.,
2006b |
|
|
HPeV-3 |
451371 (NL) |
VP1(p) |
611 |
DQ172449 |
Benschop et al.,
2006b |
|
|
HPeV-3 |
250956 (NL) |
VP1(p) |
611 |
DQ172450 |
Benschop et al.,
2006b |
|
|
HPeV-3 |
252277 (NL) |
VP1(p) |
611 |
DQ172451 |
Benschop et al.,
2006b |
|
|
HPeV-3 |
2000-632 |
VP1(p) |
595 |
EU077504 |
de Vries et al., 2008 |
|
|
HPeV-3 |
2000-752 |
VP1(p) |
595 |
EU077506 |
de Vries et al., 2008 |
|
|
HPeV-3 |
2000-759 |
VP1(p) |
617 |
EU077507 |
de Vries et al., 2008 |
|
|
HPeV-3 |
2000-976 |
VP1(p) |
611 |
EU077509 |
de Vries et al., 2008 |
|
|
HPeV-3 |
T-68 (Thailand, 2005) |
VP1 |
708 |
FJ648756 |
Pham et al., unpublished |
|
|
HPeV-3 |
T-102 (Thailand, 2005) |
VP1 |
708 |
FJ648758 |
Pham et al., unpublished |
|
|
HPeV-3 |
JP-8590 (Japan, May 2008) |
VP1 |
749 |
GQ203502 |
N.T.K. Pham and H. Ushijima, unpub. |
|
|
HPeV-3 |
JP-8624 (Japan, Jun 2008) |
VP1 |
751 |
GQ203503 |
N.T.K. Pham and H. Ushijima, unpub. |
|
|
HPeV-3 |
USA/WI/2003-10661 |
VP1 |
678 |
FJ652380 |
Nix et al., unpub. |
|
|
HPeV-3 |
USA/WI/2003-10662 |
VP1 |
678 |
FJ652381 |
Nix et al., unpub. |
|
|
HPeV-3 |
USA/WI/2004-10906 |
VP1(p) |
462 |
FJ652383 |
Nix et al., unpub. |
|
|
|
| HPeV-4 |
K251176-02 |
CG |
7366 |
DQ315670 |
Benschop et al., 2006a |
|
| HPeV-4 |
T75-4077 |
CG |
7350 |
AM235750 |
Al-Sunaidi et al., 2006 |
|
| HPeV-4 |
2006-99 |
VP1(p) |
579 |
EU077521 |
de Vries et al., 2008 |
|
| HPeV-4 |
Fuk2001-282 |
P1 |
2328 |
AB433630 |
Wakatsuki et al.,
2008 |
|
| HPeV-4 |
Fuk2005-123 |
CG |
7349 |
AB433629 |
Wakatsuki et al.,
2008 |
|
| HPeV-4 |
T-98 (Thailand/2005) |
VP1 |
758 |
FJ648755 |
Pham et al., unpublished |
|
|
HPeV-4 |
A386-07 |
VP1 |
696 |
AB469780 |
Ito et al., unpub. |
|
|
HPeV-4 |
R12644/1999/HUN |
VP0 to 2A |
3046 |
GU125397 |
Boros et al., unpub. |
|
|
HPeV-4 |
R15492/1999/HUN |
VP0 to 2A |
3046 |
GU125398 |
Boros et al., unpub. |
|
|
|
| HPeV-5 |
86-6760 (Connecticut/86) |
CG |
7352 |
AF055846 |
Oberste et al., 1998 |
12 or 13 bases missing from the 5' end of the genome |
| HPeV-5 |
T92-15 |
CG |
7320 |
AM235749 |
Al-Sunaidi et al., 2006 |
|
| HPeV-5 |
2000-1108 |
VP0(p) |
147 |
EU077510 |
de Vries et al., 2008 |
|
| HPeV-5 |
2000-1108-2 |
VP1+2A+2B |
1479 |
EU077511 |
de Vries et al., 2008 |
|
| HPeV-5 |
2000-1108-3 |
VP0 |
917 |
EU077512 |
de Vries et al., 2008 |
|
| HPeV-5 |
2000-1108-4 |
3D(p) |
445 |
EU077513 |
de Vries et al., 2008 |
|
|
|
| HPeV-6 |
NII428-2000 (Japan) |
VP0 |
867 |
AB252577 |
Watanabe et al., 2007 |
|
| HPeV-6 |
NII2392-2001 (Japan) |
VP0 |
867 |
AB252578 |
Watanabe et al., 2007 |
|
| HPeV-6 |
NII2667-2001 (Japan) |
VP0 |
867 |
AB252579 |
Watanabe et al., 2007 |
|
| HPeV-6 |
NII2694-2001 (Japan) |
VP0 |
867 |
AB252580 |
Watanabe et al., 2007 |
|
| HPeV-6 |
NII2729-2001 (Japan) |
VP0 |
867 |
AB252581 |
Watanabe et al., 2007 |
|
| HPeV-6 |
NII561-2000 (Japan) |
CG |
7347 |
AB252582 |
Watanabe et al., 2007 |
|
| HPeV-6 |
2005-823 |
CG |
7273 |
EU077518 |
de Vries et al., 2008 |
~70 nt missing from 5' end. |
| HPeV-6 |
BNI-67 (Germany) |
CG |
7097 |
EU022171 |
Baumgarte et al., 2008 |
~ 271 nt missing from 5' end. |
| HPeV-6 |
USA/WI/2004-10650 |
VP1 |
702 |
FJ652382 |
Nix et al., unpub. |
|
| HPeV-6 |
PicoBank/HPeV6/a (Finland, 2001) |
3D(p) |
742 |
FM242867 |
Williams et al., 2009 |
|
| VP1(p) |
606 |
FM242868 |
Williams et al., 2009 |
|
| HPeV-6 |
SH6 (China, 2009) |
CG |
7311 |
FJ888592 |
Shan et
al., 2010 |
Isolated from a macaque monkey. |
|
|
| HPeV-7 |
PAK5045 |
CG |
7146 |
EU556224 |
Li et al., 2009 |
|
|
|
| HPeV-8 |
BR/217/2006 |
CG |
7353 |
EU716175 |
Drexler et al.,
2009 |
|
|
|
| HPeV-9 |
BAN2004-10902 |
VP1 |
|
n/a |
Oberste et al.,
unpub. |
|
|
|
| HPeV-10 |
BAN2004-10903 |
VP1 |
|
n/a |
Oberste et al.,
unpub. |
|
| HPeV-10 |
LK-103 (Sri Lanka, Nov 2005) |
VP1 |
697 |
GQ402516 |
N.T.K. Pham and H. Ushijima, unpub. |
|
| HPeV-10 |
LK-106 (Sri Lanka, Nov 2005) |
VP1 |
702 |
GQ402515 |
N.T.K. Pham and H. Ushijima, unpub. |
|
|
|
| HPeV-11 |
BAN2004-10905 |
VP1 |
|
n/a |
Oberste et al.,
unpub. |
|
|
|
| HPeV-12 |
BAN2004-10904 |
VP1 |
|
n/a |
Oberste et al.,
unpub. |
|
|
|
| HPeV-13 |
BAN2005-10901 |
VP1 |
|
n/a |
Oberste et al.,
unpub. |
|
|
|
| HPeV-14 |
451564 (NL, 2004) |
VP1(p) |
624 |
FJ373179 |
Benschop et al.,
2008 |
|
CG = complete genome
(p) = partial gene sequence |
Abed, Y. and Boivin, G. (2005). Molecular characterization of a Canadian
human parechovirus (HPeV)-3 isolate and its relationship to other HPeVs. J. Med.
Virol. 77: 566-570.
Al-Sunaidi, M., Williams, C.H., Hughes, P.J., Schnurr, D.P. and Stanway G.
(2006). Analysis of a new human parechovirus allows the definition of
parechovirus types and the identification of RNA structural domains. J. Virol.
Sep 27; [Epub ahead of print]
Baumgarte, S., de Souza Luna, L.K., Grywna, K., Panning, M.,
Drexler, J.F., Karsten, C., Huppertz, H.I. and Drosten, C. (2008).
Prevalence, types, and RNA concentrations of human parechoviruses,
including a sixth parechovirus type, in stool samples from patients
with acute enteritis. J. Clin. Microbiol. 46: 242-248.
Benschop, K.S.M., Schinkel, J., Luken, M.E., van den Broek, P.J.M., Beersma,
M.F.C., Menelik, N., van Eijk, H.W.M., Zaaijer, H.L., VandenBroucke-Grauls,
C.M.J.E., Beld, M.G.H.M. and Wolthers, K.C. (2006a). Fourth human parechovirus
serotype. Emerging Infect. Dis. 12, 1572-1575.
Benschop, K.S., Schinkel, J., Minnaar, R.P.,
Pajkrt, D., Spanjerberg, L., Kraakman, H.C., Berkhout, B., Zaaijer,
H.L., Beld, M.G. and Wolthers, K.C. (2006b). Human parechovirus
infections in Dutch children and the association between serotype
and disease severity. Clin. Infect. Dis. 42: 204-210.
Benschop, K., Thomas, X., Serpenti, C., Molenkamp, R. and
Wolthers, K. (2008). High prevalence of human parechovirus (HPeV)
genotypes in the Amsterdam region and identification of specific
HPeV variants by direct genotyping of stool samples. J. Clin.
Microbiol. 46: 3965-3970. Epub 2008 Oct 22.
de Souza Luna, L.K., Baumgarte, S., Grywna, K., Panning, M.,
Drexler, J.F. and Drosten, C. (2008). Identification of a
contemporary human parechovirus type 1 by VIDISCA and
characterisation of its full genome. Virol J. 2008 Feb 12;5(1):26 [Epub
ahead of print]
de Vries, M., Pyrc, K., Berkhout, R., Vermeulen-Oost, W., Dijkman,
R., Jebbink, M.F., Berkhout, B., Bruisten, S. and van der Hoek, L.
Human parechovirus type 1, 3, 4, 5 and 6 detection in picornavirus
cultures. Journal of Clinical Microbiology 46: 759-762.
Drexler, J.F., Grywna, K., Stöcker, A.,
Silva Almeida, P., Medrado Ribeiro, T.C., Eschbach-Bludau, M. Petersen, N.,
da Costa Ribeiro, Jr., H. and Drosten, C. (2009). Novel human parechovirus
from Brazil. Emerg. Infect. Dis. 15: 310-313. [DOI:
10.3201/eid1502.081028].
Ghazi, F., Hughes, P.J., Hyypiä, T. and Stanway, G. (1998). Molecular analysis of
human parechovirus 2 (formerly echovirus 23). Journal of General Virology 79: 2641-2650.
Hyypiä, T., Horsnell, C., Maaronen, M., Khan, M., Kalkkinen, N., Auvinen, P.,
Kinnunen, L. and Stanway, G. (1992). A distinct picornavirus group identified by sequence
analysis. Proc. Natl. Acad. Sci., U.S.A. 89: 8847-8851.
Ito, M., Yamashita, T.,
Tsuzuki, H., Takeda, N. and Sakae,
K. (2004). Isolation and
identification of a novel
human parechovirus.
J. Gen. Virol. 85: 391-398.
Legay, V., Trompette, A.,
Chomel, J.-J., Berger, M.M.
and Lina, B. Human
parechovirus type 1 (HPEV1) 'Bahrain' strain, partial
5'NTR cDNA; partial
VP1 cDNA; partial
RNA-dependent RNA polymerase cDNA.
Unpublished. [Medical Virology, Universite
Claude Bernard Lyon I, 8 avenue Rockefeller, Lyon
69373, France]
Li, L., Victoria, J., Kapoor, A., Naeem, A., Shaukat, S., Sharif,
S., Alam, M.M., Angez, M., Zaidi, S.Z. and Delwart, E. (2009).
Genomic characterization of a novel human parechovirus type. Emerg.
Infect. Dis. 15: 288-291 [DOI:
10.3201/eid1502.080341].
Manzara, S., Muscillo, M., La Rosa, G., Marianelli, C., Cattani, P. and Fadda,
G. (2002). Molecular identification and typing of
enteroviruses isolated from clinical specimens. J. Clin. Microbiol. 40:
4554-4560.
Oberste, M.S., Maher, K. and Pallansch, M.A. (1998). Complete sequence of echovirus 23
and its relationship to echovirus 22 and other human enteroviruses. Virus Research 56:
217-223.
Shan, T.L., Guo, W., Cui, L., Shang, X.G., Dai,
X.Q., Yuan, C.L., Yu, Y., Zhang, W., Zhu, J.G., Shen, Q., Yang, Z.B.
and Hua,X.G. (2009). The first detection of human parechovirus
infections in China. J. Clin. Virol. 45: 371-372.
Stanway, G., Kalkkinen, N., Roivainen, M., Ghazi, F., Khan, M., Smyth, M., Meurman, O.
and Hyypiä, T. (1994). Molecular and biological characteristics of echovirus 22, a
representative of a new picornavirus group. J. Virol. 68: 8232-8238.
Wakatsuki, K., Kawamoto, D., Hiwaki, H., Watanabe, K. and
Yoshida, H. (2008). Identification and characterization of two
strains of human parechovirus 4 RT isolated from two clinical cases
in Fukuoka City, Japan. J. Clin. Microbiol. 46: 3144-3146.
Watanabe, K., Oie, M., Higuchi, M., Nishikawa, M. and Fujii, M.
(2007). Isolation and characterization of novel human parechovirus
from clinical samples. Emerg. Infect. Dis. 13: 889-895.
Williams, C.H., Panayiotou, M., Girling, G.D., Peard, C.I.,
Oikarinen, S., Hyoty, H. and Stanway, G. (2009). Evolution and
conservation in human parechovirus genomes. J. Gen. Virol. 90:
1702-1712.
Zoll, J., Galama, J.M.D. and van Kuppeveld, F.J.M. (2009).
Identification of potential recombination breakpoints in human parechoviruses. J. Virol. 83:
3379-3383.
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