LV seqs

CG = complete genome; (p) = partial gene sequence
Virus	Strain	Region	Length	Accession No.	Reference	Comments
Ljungan virus (LV)
LV	87-012	CG	7607	AF327920	Johansson et al., 2002
LV	87-012G	CG	7635	EF202833	Johansson et al., 2004; Ekstrom et al., 2007	cell culture adapted 87-012
LV	174F	CG	7608	AF327921	Johansson et al., 2002
LV	145SL	5'UTR(p)+VP0+VP3	2118	AF020541	Niklasson et al., 1998
LV	145SL	CG	7609	AF327922	Johansson et al., 2002
LV	M1146	CG*	7495	AF538689	Johansson et al., 2003	* 94 nt missing from 5' end

References

Ekstrom, J.O., Tolf, C., Fahlgren, C., Johansson, E.S., Arbrandt, G., Niklasson, B., Edman, K.A. and Lindberg, A.M. (2007). Replication of Ljungan virus in cell culture: The genomic 5'-end, infectious cDNA clones and host cell response to viral infections Virus Res. 130: 129-139.

Johansson, S., Niklasson, B., Maizel, J. Gorbalenya, A.E. and Lindberg, A.M. (2002). Molecular analysis of three Ljungan virus isolates reveals a new, close-to-root lineage of the Picornaviridae with a cluster of two unrelated 2A proteins.J. Virol. 76: 8920-8930.

Johansson, E.S., Niklasson, B., Tesh, R.B., Shafren, D.R., Travassos Da Rosa, A.P.A. and Lindberg, A.M. (2003). Molecular characterization of M1146, an American isolate of Ljungan virus (LV) reveals the presence of a new LV genotype. J. Gen. Virol. 84: 837-844.

Johansson, E.S., Ekstrom, J.-O., Shafren, D.R., Frisk, G., Hyypia, T., Edman, K. and Lindberg, A.M. (2004).
Cell culture propagation and biochemical analysis of the Ljungan virus prototype strain Biochem. Biophys. Res. Commun. 317: 1023-1029.

Niklasson, B., Kinnunen, L., Hornfeldt, B., Horling, J., Benemar, C., Hedlund, K.O., Matskova, L., Hyypiä, T. and Winberg, G. (1999). A new picornavirus isolated from bank voles (Clethrionomys glareolus). Virology 255: 86-93.

Species: Ljungan virus

Ljungan virus (LV)

References