| |
Proposed genus: Sapelovirus
Proposed species:
"Porcine sapelovirus"
(currently
Porcine enterovirus A in the
Enterovirus genus)
Serotype: Porcine enterovirus 8 (PEV-8)
(proposed "Porcine sapelovirus") |
|
| 5' UTR |
L |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
| |
|
|
(White areas indicate genes which haven't yet been
sequenced completely;
grey areas are where only partial sequences exist)
| Virus |
Strain |
Region
|
Length
|
Accession No.
|
Reference |
Comments |
Porcine enterovirus 8 (PEV-8) (proposed "Porcine sapelovirus" [PSV])
|
| PEV-8 |
V13* (England/57) |
3D(p)+3'NCR |
1404 |
AJ001391 |
J. Peng, F. Lin, R.P. Kitching and N.J. Knowles, unpub. |
|
|
VP2(p) |
162 |
AB049559 |
Kaku et al., 2001 |
|
| CG |
7491 |
AF406813 |
Krumbholz et al., 2002 |
5' end missing |
| PEV-8 |
A1 |
3D(p) |
198 |
N/A |
F. Lin and N.J. Knowles, unpub. |
|
| PEV-8 |
MV 2-76 (Malta/76) |
3D(p) |
414 |
N/A |
F. Lin and N.J. Knowles, unpub. |
|
|
PEV-8 |
SF16 (J4) |
VP2(p) |
161 |
AB049560 |
Kaku et al., 2001 |
|
|
3D(p) |
865 |
AB049542 |
Kaku et al., 2001 |
|
|
PEV-8? |
IP1 (J6) |
VP2(p) |
161 |
AB049561 |
Kaku et al., 2001 |
|
|
3D(p) |
865 |
AB049543 |
Kaku et al., 2001 |
|
|
PEV-8 |
Po 5116 |
5' UTR(p)+L+P1+2A+2B(p) |
3969 |
AY392538 |
Zell et al.,
unpublished |
|
|
PEV-8 |
16-S-X |
5' UTR(p)+L+P1+2A+2B(p) |
3699 |
AY392543 |
Zell et al.,
unpublished |
|
|
PEV-8 |
26-T-XII |
5' UTR(p)+L+P1+2A+2B(p) |
3688 |
AY392544 |
Zell et al.,
unpublished |
|
|
PEV-8 |
38-V-II |
5' UTR(p)+L+VP4(p) |
751 |
AY392545 |
Zell et al.,
unpublished |
|
|
PEV-8 |
Sek 1562/98 |
5' UTR(p)+L+P1+2A+2B(p) |
3968 |
AY392556 |
Zell et al.,
unpublished |
|
|
PEV-8 |
Swine/IT/144/1992 |
5' UTR(p) |
152 |
AM260995 |
La Rosa et al., 2006 |
|
|
PEV-8 |
Swine/IT/145/1992 |
5' UTR(p) |
152 |
AM260996 |
La Rosa et al., 2006 |
|
|
PEV-8 |
Swine/IT/287/1995 |
5' UTR(p) |
152 |
AM260997 |
La Rosa et al., 2006 |
|
|
PEV-8 |
Swine/IT/288/1995 |
5' UTR(p) |
153 |
AM260998 |
La Rosa et al., 2006 |
|
|
PEV-8 |
Swine/IT/292/1995 |
5' UTR(p) |
152 |
AM260999 |
La Rosa et al., 2006 |
|
|
PEV-8 |
Swine/IT/293/1995 |
5' UTR(p) |
152 |
AM261000 |
La Rosa et al., 2006 |
|
|
PEV-8 |
Swine/IT/294/1995 |
5' UTR(p) |
152 |
AM261001 |
La Rosa et al., 2006 |
|
|
PEV-8 |
Swine/IT/296/1996 |
5' UTR(p) |
152 |
AM261002 |
La Rosa et al., 2006 |
|
|
PEV-8 |
Swine/IT/303/1996 |
5' UTR(p) |
152 |
AM261003 |
La Rosa et al., 2006 |
|
|
PEV-8 |
Swine/IT/307/1997 |
5' UTR(p) |
152 |
AM261004 |
La Rosa et al., 2006 |
|
|
PEV-8 |
Swine/IT/309/1997 |
5' UTR(p) |
152 |
AM261005 |
La Rosa et al., 2006 |
|
|
PEV-8 |
Swine/IT/310/1997 |
5' UTR(p) |
152 |
AM261006 |
La Rosa et al., 2006 |
|
|
PEV-8 |
Swine/IT/311/1997 |
5' UTR(p) |
152 |
AM261007 |
La Rosa et al., 2006 |
|
|
PEV-8 |
Swine/IT/316/1997 |
5' UTR(p) |
152 |
AM261008 |
La Rosa et al., 2006 |
|
CG, complete genome
(p), partial gene sequence
*, prototype strain |
References
Kaku, Y., Sarai, A. and Murakami, Y. (2001). Genetic reclassification of porcine
enteroviruses. J. Gen. Virol. 82: 417-424.
Krumbholz, A., Dauber, M., Henke, A., Birch-Hirschfeld, E., Knowles, N.J.,
Stelzner, A. and Zell, R. (2002). Sequencing of porcine enterovirus groups II
and III reveals unique features of both virus groups. J. Virol. 76: 5813-5821.
La Rosa, G., Muscillo, M., Di Grazia, A., Fontana,
S., Iaconelli, M. and Tollis, M. (2006). Validation of rt-PCR assays
for molecular characterization of porcine teschoviruses and
enteroviruses. J. Vet. Med. B Infect. Dis. Vet. Public Health 53:
257-265.
Zell, R., Krumbholz, A., Henke, A., Wurm, Rd. and
Dauber, M. Molecular diversity of porcine and simian picornaviruses.
Unpublished.
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