| |
Proposed genus: "Senacavirus"
Proposed species:
"Seneca Valley virus"
| Serotype: Seneca Valley virus (SVV) |
|
| 5' UTR |
L |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
| |
|
|
(White areas indicate genes which haven't yet been
sequenced completely;
grey areas are where only partial sequences exist)
| Virus |
Strain |
Region
|
Length
|
Accession No.
|
Reference |
Comments |
Seneca Valley virus (SVV)
|
| SVV |
SVV-001* |
CG |
7310 |
DQ641257 |
Knowles & Hallenbeck, 2005;
Hales et al., 2008 |
|
| SVV |
88-23626
(NC, 1988) |
VP3(p)+VP1+2A(p) |
936 |
EU271759 |
Hales et al., unpub. |
|
| 3D(p)+3'UTR |
460 |
EU271766 |
Hales et al., unpub. |
|
| SVV |
88-36695
(MN, 1988) |
VP3(p)+VP1+2A(p) |
936 |
EU271760 |
Hales et al., unpub. |
|
| 3D(p)+3'UTR |
460 |
EU271767 |
Hales et al., unpub. |
|
| SVV |
89-47752
(IA, 1989) |
VP2(p)+VP3+VP1+2A(p) |
1560 |
EU271757 |
Hales et al., unpub. |
|
| 2C(p) |
425 |
EU271764 |
Hales et al., unpub. |
|
| 3D(p)+3'UTR |
460 |
EU271768 |
Hales et al., unpub. |
|
| SVV |
90-10324
(NJ, 1989) |
VP3(p)+VP1+2A(p) |
936 |
EU271761 |
Hales et al., unpub. |
|
| 3D(p)+3'UTR |
460 |
EU271769 |
Hales et al., unpub. |
|
| SVV |
92-48963
(IL, 1992) |
VP3(p)+VP1+2A(p) |
936 |
EU271762 |
Hales et al., unpub. |
|
| 3D(p)+3'UTR |
460 |
EU271770 |
Hales et al., unpub. |
|
| SVV |
1278
(LA, 1997) |
VP3(p)+VP1+2A(p) |
936 |
EU271763 |
Hales et al., unpub. |
|
| 3D(p)+3'UTR |
460 |
EU271771 |
Hales et al., unpub. |
|
| SVV |
131395
(CA, 2001) |
VP2(p)+VP3+VP1+2A(p) |
1560 |
EU271758 |
Hales et al., unpub. |
|
| 2C(p) |
425 |
EU271765 |
Hales et al., unpub. |
|
| 3D(p)+3'UTR |
460 |
EU271772 |
Hales et al., unpub. |
|
CG, complete genome
(p), partial gene sequence
*, prototype strain |
References
Hales, L.M., Knowles, N.J., Reddy,
P.S., Xu, L., Hay, C. and Hallenbeck, P.L. (2008). Complete genome
sequence analysis of Seneca Valley virus-001, a novel oncolytic
picornavirus. Journal of General Virology 89: 1265-1275.
Hales, L.M., Knowles, N.J. Jones,
B.H., Landgraf, J.G., Swenson, S.L., House, J.A., Skele, K.L.,
Burroughs, K.D. and Hallenbeck, P.L. Swine are susceptible to
infection with Seneca Valley virus, a new species of picornavirus.
Unpublished.
Knowles, N.J. and Hallenbeck, P.L.
(2005). A new picornavirus is most closely related to cardioviruses.
EUROPIC 2005: XIIIth Meeting of the European Study Group on the
Molecular Biology of Picornaviruses, Lunteren, The Netherlands,
23-29th May 2005. Abstract A14.
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