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Unassigned
  Genus: Avihepatovirus

Species: Avihepatovirus A (formerly named Duck hepatitis A virus)

Serotype: duck hepatitis A virus 3 (DHAV-3)  
5' UTR VP0 VP3 VP1 2A1 2A2 2A3 2B 2C 3A 3B 3C 3D 3' UTR
    (DHAV-3 may contain 1, 2 or 3 2A genes)

(White areas indicate genes which haven't yet been sequenced completely; grey areas are where only partial sequences exist)

Virus Strain Region Length* Accession No. Reference Comments

Duck hepatitis A virus 3 (DHAV-3)

DHAV-3 duck/AP-03337/KOR/2003-4 CG 7790 DQ256132 Kim et al., 2007a  
DHAV-3 duck/AP-04009/KOR/2003-4 CG 7790 DQ256133 Kim et al., 2007a  
DHAV-3 duck/AP-04203/KOR/2003-4 CG 7784 DQ256134 Kim et al., 2007a  
DHAV-3 duck/AP-04114/KOR/2003 CG 7775 DQ812093 Kim et al., 2007b  
DHAV-3 duck/GD-1/China VP1 720 EU289393 Wang et al., unpub.  
DHAV-3 B63/China CG 7774 EU747874 Wu et al., unpub.  
DHAV-3 cherry duck/G/China/1999 CG 7786 EU755009 Shi et al., unpub.  
DHAV-3 duck/C-GY/China CG 7788 EU352805 Pan et al., unpub.  
DHAV-3 duck/C-HRY/China/2007 VP1 720 FJ626665 Peng et al., unpub.  
DHAV-3 duck/C-LX/China/2007 VP1 720 FJ626667 Peng et al., unpub.  
DHAV-3 duck/C-NXC/China/2007 VP1 720 FJ626669 Peng et al., unpub.  
DHAV-3 duck/C-PSY/China/2006 VP1 720 FJ626670 Peng et al., unpub.  
DHAV-3 duck/C-YCZ/China/2005 VP1 720 FJ626672 Peng et al., unpub.  
DHAV-3 duck/C-YZC/China/2007 VP1 720 FJ626673 Peng et al., unpub.  
DHAV-3 duck/FS/China/2008 CG 7792 EU877916 He et al., unpub.  
DHAV-3 duck/GD/China/1999 CG 7786 GQ122332 Yuan et al., unpub.  
DHAV-3 duck/SD01/China/2008 CG 7788 GQ485310 Yuan et al., unpub.  
DHAV-3 duck/SD02/China/2009 CG 7788 GQ485311 Yuan et al., unpub.  
DHAV-3 duck/C-YDF/China CG 7773 GU066821 Pan et al., unpub.  
DHAV-3 duck/C-BLZ/China CG 7773 GU066822 Pan et al., unpub.  
DHAV-3 duck/C-YCZ/China CG 7773 GU066823 Pan et al., unpub.  
DHAV-3 duck/C-YCW/China CG 7773 GU066824 Pan et al., unpub.  
DHAV-3 duck/1v/Shandong/China CG 7793 GU250782 Zhao et al., unpub.  
DHAV-3 duck/FJ01/China/2009 VP1 720 HM060190 Shi and Huang, unpub.  
DHAV-3 duck/DN2/Vietnam/2009 CG 7789 JF914944 Doan et al., unpub.  
DHAV-3 duck/BM/Vietnam/2009 VP1 720 JF925119 Doan et al., unpub.  
DHAV-3 duck/DN1/Vietnam/2009 VP1 720 JF925120 Doan et al., unpub.  
DHAV-3 duck/NC/Vietnam/2009 VP1 720 JF925121 Doan et al., unpub.  
DHAV-3 duck/VXAC/Vietnam/2009 VP1 714 JF957697 Doan et al., unpub. vaccine strain
DHAV-3 duck/JS2010/China/2010 CG 7775 HQ654774 Cao et al., unpub.  
DHAV-3 goose/JT/China/2010 CG 7793 JF835025 Liu et al., 2011  
DHAV-3 duck/SD1101/China/2010 CG 7794 JQ409566 Xu et al., unpub.  
DHAV-3 duck/CH/LGD/090818/China/2009 CG 7761 JF828994 Liu et al., unpub.  
DHAV-3 duck/CH/LSD/090612/China/2009 CG 7761 JF828995 Liu et al., unpub.  
DHAV-3 duck/CH/LJS/090905/China/2009 CG 7761 JF828996 Liu et al., unpub.  
DHAV-3 duck/Guangdong/B-N/2011 CG 7782 JX235698 Wei et al., 2012  
DHAV-3 duck/D11-JW-018/KOR/2011 CG 7784 JX312194 Cha et al., unpub.  
DHAV-3 duck/C-PJK/CHN/2009 VP1 720 KC282430 Pi et al., unpub.  
DHAV-3 duck/12-01/China/2012 CG 7800 KC893553 Liu et al., unpub.  
DHAV-3 duck/SD1201/China/2011 CG 7791 KC993890 Yang et al., unpub.  
DHAV-3 duck/FX/China/2008 VP1 720 KF826745 Ma et al., unpub.  
DHAV-3 duck/JS/China/2008 VP1 720 KF826746 Ma et al., unpub.  
DHAV-3 duck/HKY/China/2011 VP1 720 KF826756 Ma et al., unpub.  
DHAV-3 duck/TA/China/2011 VP1 720 KF826757 Ma et al., unpub.  
DHAV-3 duck/FH/China/2011 VP1 720 KF826758 Ma et al., unpub.  
DHAV-3 duck/HC/China/2011 VP1 720 KF826759 Ma et al., unpub.  
DHAV-3 duck/JS2/China/2012 VP1 720 KF826762 Ma et al., unpub.  
DHAV-3 duck/JM/China/2012 VP1 720 KF826763 Ma et al., unpub.  
DHAV-3 duck/JNA/China/2013 VP1 720 KF826765 Ma et al., unpub.  
DHAV-3 duck/JNH/China/2013 VP1 720 KF826766 Ma et al., unpub.  
DHAV-3 duck/DN2/Vietnam/2009 VP1 720 KM361877 Doan et al., unpub.  
DHAV-3 duck/HY/Vietnam/2010 VP1 720 KM361878 Doan et al., unpub.  
DHAV-3 duck/KHO1/Vietnam/2012 VP1 720 KM361879 Doan et al., unpub.  
DHAV-3 duck/KHO2/Vietnam/2012 VP1 720 KM361880 Doan et al., unpub.  
DHAV-3 duck/LA1/Vietnam/2011 VP1 720 KM361881 Doan et al., unpub.  
DHAV-3 duck/NT2/Vietnam/2013 VP1 720 KM361882 Doan et al., unpub.  
DHAV-3 duck/NT/Vietnam/2013 VP1 720 KM361883 Doan et al., unpub.  
DHAV-3 goose/EY/China/2014 CG 7793 KP995438 Zhang et al., unpub.
DHAV-3 duck/HBGT/China/2014 CG 7799 KX290465 Ding et al., unpub.
DHAV-3 duck/HBGT01/China/2015 CG 7799 KU510329 Yang et al., unpub.  
DHAV-3 duck/CH-P10/China/2015 CG 7788 MH752740 Wen et al., unpub. serial passage in duck embryos
DHAV-3 duck/CH-P30/China/2015 CG 7788 MH752741 Wen et al., unpub. serial passage in duck embryos
DHAV-3 duck/CH-P60/China/2015 CG 7788 MH752742 Wen et al., unpub. serial passage in duck embryos
DHAV-3 duck/CH-P90/China/2015 CG 7788 MH752743 Wen et al., unpub. serial passage in duck embryos
DHAV-3 duck/CH-P120/China/2015 CG 7788 MH752744 Wen et al., unpub. serial passage in duck embryos
DHAV-3 duck/JS/China/2017 CG 7784 MN164467 Zhao & Chen, unpub.  
DHAV-3 duck/SD/China/2011 CG 7778 MN953474 Wu et al., 2020 virulent strain
DHAV-3 duck/SD70/China/2013 CG 7778 MN953475 Wu et al., 2020 attenuated strain
             
CG = complete genome; (p) = partial gene sequence.
* length with poly(A) tails removed.

References

Kim, M.C., Kwon, Y.K., Joh, S.J., Kwon, J.H., Kim, J.H. and Kim, S.J. (2007). Development of one-step reverse transcriptase-polymerase chain reaction to detect duck hepatitis virus type 1. Avian Dis. 51: 540-545.

Kim, M.C., Kwon, Y.K., Joh, S.J., Kim, S.J., Tolf, C., Kim, J.H., Sung, H.W., Lindberg, A.M. and Kwon, J.H. (2007b). Recent Korean isolates of duck hepatitis virus reveal the presence of a new geno- and serotype when compared to duck hepatitis virus type 1 type strains. Arch. Virol. 152: 2059-2072.

Liu, M., Meng, F., Li, X.J., Zhang, Z., Liu, S. and Zhang, Y. (2011). Goose haemorrhagic hepatitis caused by a new subtype duck hepatitis type 1 virus. Vet. Microbiol. 152: 280-283.

Wei, C., Su, S., Huang, Z., Zhu, W.J., Chen, J.D., Zhao, F.R., Wang, Y.J., Xie, J.X., Wang, H. and Zhang, G. (2012). Complete genome sequence of a novel duck hepatitis A virus discovered in Southern China. J. Virol. 86: 10247.

Wu, F., Lu, F., Fan, X., Pan, Q., Zhao, S., Sun, H., Zhang, J., Liu, C., Chao, J., & Zhang, X. (2020). Development of a live attenuated duck hepatitis A virus type 3 vaccine (strain SD70). Vaccine, 38(30), 46954703. https://doi.org/10.1016/j.vaccine.2020.05.030

 

 

 

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