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 Unassigned HepV seqs

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Genus: Hepatovirus

Species: multiple, unassigned

Didelphis aurita
 hepatitis A virus
 
5' UTR VP4 VP2 VP3 VP1 pX 2B 2C 3A 3B 3C 3D 3' UTR
Candidate species 7  
5' UTR VP4 VP2 VP3 VP1 pX 2B 2C 3A 3B 3C 3D 3' UTR
Candidate species 9  
5' UTR VP4 VP2 VP3 VP1 pX 2B 2C 3A 3B 3C 3D 3' UTR
Candidate species 10
5' UTR VP4 VP2 VP3 VP1 pX 2B 2C 3A 3B 3C 3D 3' UTR
Candidate species 11  
5' UTR VP4 VP2 VP3 VP1 pX 2B 2C 3A 3B 3C 3D 3' UTR
Candidate species 12  
5' UTR VP4 VP2 VP3 VP1 pX 2B 2C 3A 3B 3C 3D 3' UTR

(White areas indicate genes which haven't yet been sequenced completely; grey areas are where only partial sequences exist)

Virus Strain Region Length

Accession No.

Reference Comments

Didelphis aurita hepatitis A virus

DaHV opossum/Brazil/2015 CG(p) 7436 MG181943 de Oliveira Carneiro et al., 2018  
             

Candidate species 7

Bat HV Rcet884Minsch2008 VP2(p)+VP3(p) 864 KT452745 Drexler et al., 2015  
             

Candidate species 9

Bat HV NL2012BPipkuh2012 VP2(p)+VP3(p) 864 KT452746 Drexler et al., 2015  
             

Candidate species 10

Bat HV NMS0921Nycnoc2009 VP2(p)+VP3(p) 864 KT452747 Drexler et al., 2015  
             

Candidate species 11

Rodent HV BTSMN2Micnam2012 VP2(p)+VP3(p) 861 KT452736 Drexler et al., 2015  
             

Candidate species 12? (most closely related to Hepatovirus H)

Bat HV bat3206/Hipposideros_armiger/2011 CG(p) 7184 MG559674 Li et al., 2018  
Bat HV bat7000/Hipposideros_armiger/2014 3D(p) 240 MG559666 Li et al., 2018  
Bat HV bat7036/Hipposideros_armiger/2014 3D(p) 240 MG559667 Li et al., 2018  
Bat HV bat2555/Hipposideros_armiger/2011 3D(p) 210 MG559668 Li et al., 2018  
Bat HV bat2558/Hipposideros_armiger/2011 3D(p) 210 MG559669 Li et al., 2018  
Bat HV bat3625/Hipposideros_armiger/2012 3D(p) 240 MG559670 Li et al., 2018  
Bat HV bat2494/Hipposideros_armiger/2011 3D(p) 216 MG559671 Li et al., 2018  
Bat HV bat2513/Hipposideros_armiger/2011 3D(p) 552 MG559672 Li et al., 2018  
Bat HV bat3206/Hipposideros_armiger/2011 3D(p) 546 MG559673 Li et al., 2018  
             
CG = complete genome; (p) = partial gene sequence

References

de Oliveira Carneiro I, Sander AL, Silva N, Moreira-Soto A, Normann A, Flehmig B, Lukashev AN, Dotzauer A, Wieseke N, Franke CR, Drexler JF. A novel marsupial hepatitis A virus corroborates complex evolutionary patterns shaping the genus Hepatovirus. J Virol. 2018 Apr 25. pii: JVI.00082-18. doi: 10.1128/JVI.00082-18. [Epub ahead of print] PubMed PMID: 29695421.

Drexler, J.F., Corman, V.M., Lukashev, A.N., van den Brand, J.M.A., Gmyl, A.P., Brünink, S., Rasche, A., Seggewiβ, N., Feng, H., Leijten, L.M., Vallo, P., Kuiken, T., Dotzauer, A., Ulrich, R.G., Lemon, S.M., Drosten, C. and the Hepatovirus Ecology Consortium. (2015). Evolutionary origins of hepatitis A virus in small mammals. Proc. Natl. Acad. Sci. USA 2015; published ahead of print November 2, 2015, doi:10.1073/pnas.1516992112

Li W, Wang B, Li B, Zhang W, Zhu Y, Shi ZL, Yang XL. (2018). Genomic characterization of a novel hepatovirus from great roundleaf bats in China. Virol Sin. 2018 Feb 19. doi: 10.1007/s12250-018-0013-6. [Epub ahead of print] PubMed PMID: 29460117.

 
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