The
Picornavirus
Pages
 Limnipivirus B

Child level

Limnipivirus B seqs

Same level

Home
Up
Limnipivirus A
Limnipivirus B
Limnipivirus C
  Carp picornavirus  1 (CPV-1) infects the common carp (Cyprinus carpio), a freshwater fish. 7634 nt of the genome including 524 nt of the 5' UTR and 284 nt of the unusually long 3' UTR have been sequenced (Lange et al., 2012, 2014). Like bluegill picornavirus 1 (BGPV-1), CPV-1 is predicted to possess two 2A polypeptides both with NPG↓P motifs, the second of which is 133 aa in length.

Wenling bighead beaked sandfish picornavirus (MG600092) is closely related (~75% nt / ~82% aa identity in VP1).

Genome organisation

VPg+5'UTRIRES-IV[1AB−1C−1D−2A1npgp/2A2npgp/2B−2C/3A−3BVPg−3Cpro−3Dpol]3'UTR−poly(A)

References

Lange J., Dauber, M., Fichtner, D., Groth, M., Platzer, M., Wutzler, P. and Zell, R. (2012). Sequencing of carp picornavirus reveals a second fish picornavirus lineage. Europic 2012: XVIIth Meeting of the European Study Group on the Molecular Biology of Picornaviruses, Saint RaphaŽl, France, 3-7 June 2012.

Lange, J., Groth, M., Fichtner, D., Granzow, H., Keller, B., Walther, M., Platzer, M., Sauerbrei, A. and Zell, R. (2014). Virus isolate from carp: genetic characterisation reveals a novel picornavirus with two aphthovirus 2A-like sequences. J. Gen. Virol. 95: 80-90 [Epub 2013 Oct 12].
Copyright © 2006 - The Pirbright Institute, UK. All Rights Reserved.