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 Sorry
this way out-of-date...hopefully more news soon - NJK. |
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January/February 2004 |
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Two complete Avian Encephalomyelitis Virus genome sequences have been
submitted to the public databases (see
the AEV page for more details). |
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November 2003 |
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In August 2003 the complete VP1 sequences of ALL human rhinovirus
serotypes were released onto the public databases
[AY355180
to AY355281]: Ledford, R.M., Patel, N.R., Tull, T.M.,
Watanyar, A., Herbertz, T., Collett, M.S. and Pevear, D.C. VP1
sequencing of all human rhinovirus serotypes: insights into genus
phylogeny and susceptibility to antiviral capsid-binding compounds.
Unpublished. |
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October 2003 |
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Poliovirus recombination:
Liu, H.M., Zheng, D.P., Zhang, L.B., Oberste, M.S., Kew, O.M. and
Pallansch, M.A. (2003). Serial recombination during circulation of type
1 wild-vaccine recombinant polioviruses in China. J. Virol. 77:
10994-11005.
Aichi virus
leader protein function:
Sasaki, J., Nagashima, S. and Taniguchi, K. (2003). Aichi virus leader
protein is involved in viral RNA replication and encapsidation. J. Virol.
77: 10799-10807.
Enterovirus
recombination:
Lukashev, A.N., Lashkevich, V.A., Ivanova, O.E., Koroleva, G.A.,
Hinkkanen, A.E., Ilonen, J. (2003). Recombination in circulating
enteroviruses. J. Virol.77: 10423-10431.
Description of
bovine kobuvirus: a new species in the genus Kobuvirus:
Yamashita, T., Ito, M., Kabashima, Y., Tsuzuki, H., Fujiura, A. and
Sakae, K. (2003). Isolation and characterization of a new species of
kobuvirus associated with cattle. J. Gen. Virol. 84: 3069-3077.
Human
enterovirus C receptor interactions:
Newcombe, N.G., Andersson, P., Johansson, E.S., Au, G.G.,
Lindberg, A.M., Barry, R.D. and Shafren, D.R. (2003). Cellular receptor
interactions of C-cluster human group A coxsackieviruses. J. Gen. Virol.
84: 3041-3050. |
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September 2003 |
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New picornavirus genus proposed for the second time:
Oberste, M.S., Maher, K. and Mark A. Pallansch, M. (2003). Genomic
evidence that simian virus 2 and six other simian picornaviruses
represent a new genus in Picornaviridae. Virology 314: 283-293.
See also:
Krumbholz, A., Dauber, M., Henke, A., Birch-Hirschfeld,
E., Knowles, N.J., Stelzner, A. and Zell, R. (2002). Sequencing of
porcine enterovirus groups II and III reveals unique features of both
virus groups. Journal of Virology 76: 5813-5821. |
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August 2003 |
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Second
crystal structure of SVDV (strain SPA/2/93):
Verdaguer, N., Jimenez-Clavero, M.A., Fita, I. and Ley,
V. (2003). Structure of swine vesicular disease virus: mapping of
changes occurring during adaptation of human coxsackie B5 virus to
infect swine. J. Virol. 77: 9780-9789. |
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July 2003 |
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The complete genome sequences of all the HEV-C species members:
Brown, B., Oberste, M.S., Maher, K. and, Pallansch, M.A. (2003).
Complete genomic sequencing shows that polioviruses and members of human
enterovirus species C are closely related in the noncapsid coding
region. J. Virol. 77: 8973-8984. (See the
HEV-C sequence database page for accession numbers) |
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A
new Human enterovirus B serotype [AJ493062]:
Bailly, J.L., Cardoso, M.C. and Peigue-Lafeuille, H. Identification of a
new type of enterovirus B following characterization of an untypeable
isolate with a recombinant genome. Unpublished |
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April 2003 |
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New human enterovirus serotypes:
Norder, H., Bjerregaard, L., Magnius, L., Lina, B., Aymard, M. and
Chomel, J.J. (2003). Sequencing of 'untypable' enteroviruses reveals two
new types, EV-77 and EV-78, within human enterovirus type B and
substitutions in the BC loop of the VP1 protein for known types. Journal
of General Virology 84: 827-836. |
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The complete
genome sequences of the Taiwan 99 [AJ539136,
AJ539137],
China 99 [AJ539138],
South Korea 2000 [AJ539139],
South Africa 2000 [AJ539140]
and UK 2001 [AJ539141]
FMDV-O PanAsia isolates: Mason, P.W., Pacheco, J.M., Zhao, Q.-Z. and
Knowles, N.J. (2003). Comparisons of the complete genomes of Asian,
African and European isolates of a recent foot-and-mouth disease virus
type O pandemic strain (PanAsia). Journal of General Virology 84:
1583-1593. |
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The crystal
structure of swine vesicular disease virus (strain UKG/27/72):
Fry, E.E., Knowles, N.J., Newman, J.W.I., Wilsden, G.,
Rao, Z., King, A.M.Q., and Stuart, D.I. (2003). Crystal structure of
swine vesicular disease virus and implications for host adaptation.
Journal of Virology 77: 5475-5486. |
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(Nearly)
complete genome sequence of an American Ljungan virus [AF538689].
Johansson ES, Niklasson B, Tesh RB, Shafren DR, Travassos da Rosa AP,
Lindberg AM. (2003). Molecular characterization of M1146, an American
isolate of Ljungan virus (LV) reveals the presence of a new LV genotype.
J Gen Virol. 84: 837-844. |
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March 2003 |
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(Nearly) complete genome sequence of a Theiler's-like virus isolated
from rats [AB090161].
Ohsawa, K., Watanabe, Y., Miyata, H. and Sato, H. (2003). Genetic
analysis of a Theiler's-like virus isolated from rats. Comparative
Medicine 53: 44-49. |
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December 2002 |
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(Nearly) complete genome sequence of simian virus 2
(SV2) released [AY064708]
along with
partial sequences for related simian picornaviruses |
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November 2002 |
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A new kobuvirus of cattle [AB084788] |
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A new human parechovirus lacking the RGD tripeptide in VP1 [AB084913] |
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Human
rhinovirus 87 confirmed as an isolate of Enterovirus
68:
Blomqvist S, Savolainen C, Raman L, Roivainen M, Hovi T.
(2002). Human rhinovirus 87 and enterovirus 68
represent a unique serotype with rhinovirus and enterovirus features. J
Clin Microbiol. 40: 4218-4223.
Ishiko, H., Miura,
R., Shimada, Y.,
Hayashi, A.,
Nakajima, H.,
Yamazaki, S. and
Takeda, N. (2002).
Human rhinovirus 87 identified as human enterovirus 68 by
VP4-based molecular diagnosis. Intervirology 45:
136-141. |
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September 2002 |
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Three complete Ljungan virus sequences [AF327920;
AF327921;
AF327922].
Johansson, S., Niklasson,
B., Maizel, J. Gorbalenya, A.E. and
Lindberg, A.M.
(2002). Molecular analysis of three Ljungan virus isolates reveals a
new, close-to-root lineage of the Picornaviridae with a cluster
of two unrelated 2A proteins.J. Virol. 76: 8920-8930. |
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June 2002 |
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New porcine enterovirus sequences:
[PEV-8, AF406813;
PEV-9, AF363453;
PEV-10, AF363455]
Krumbholz, A., Dauber, M., Henke, A., Birch-Hirschfeld,
E., Knowles, N.J., Stelzner, A. and Zell, R. (2002). Sequencing of
porcine enterovirus groups II and III reveals unique features of both
virus groups. Journal of Virology 76: 5813-5821. |
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February 2002 |
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Human
rhinovirus classification:
Savolainen, C., Blomqvist, S., Mulders, M.N. and Hovi, T.
(2002).
Genetic clustering of all 102 human rhinovirus prototype strains:
serotype 87 is close to human enterovirus 70. J. Gen. Virol. 83:
333-340. |
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Simian
picornavirus reclassification:
Oberste, M.S., Maher, K. and Pallansch. M.A. (2002).
Molecular phylogeny and proposed classification of the simian
picornaviruses.
J. Virol. 76: 1244-1251. |
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2001 and earlier |
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Equine
rhinovirus 3 is a second serotype of equine rhinitis B virus [AF361253].
Huang, J.-A., Ficorilli, N., Hartley, C.A., Wilcox, R.S., Weiss, M. and
Studdert, M.J. Equine rhinitis B virus: a new serotype. J. gen. Virol.
82: 2641-2645. |
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The sequence of avian nephritis virus 2 reveals that, like ANV-1,
it is an astrovirus and not a picornavirus |
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The sequence of
the capsid-coding region (AF277378),
and more recently the complete genome (AF277675),
of Taura syndrome virus (TSV), a picorna-like virus of marine
penaeid shrimp, reveals that it is probably a member of the "Cricket
paralysis-like viruses" and not a picornavirus |
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The complete genome sequence of avian nephritis virus 1 reveals
that it is not a picornavirus |
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Ljungan Virus: A New Parecho-like Virus Isolated from
Bank Voles (AF020541) |
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Enterovirus outbreak in children in Taiwan (sequences now available
- AF119795;
AF119796) |
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Enterovirus outbreak (Info on the recent EV-71 outbreaks)
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Reports of human
enteroviruses in fish (Cotor
et al., 1990;
Myjak et al., 1995) |
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