The
Picornavirus
Pages
 Cadicivirus A seqs

Child level

Same level

Home
Up
  Genus: Dicipivirus

Species: Cadicivirus A

Type: canine picodicistrovirus 1 (CaPdV-1)
5' UTR VP4 VP2 VP3 VP1 IGR 2A 2B 2C 3A 3B 3C 3D 3' UTR

(White areas indicate genes which haven't yet been sequenced completely; grey areas are where only partial sequences exist)

 

 
 
Virus Strain Region Length Accession no. Reference Comments

Canine picodicistrovirus 1 (CaPdV-1)

CaPdV dog/209/Hong Kong/2008 CG 8785 JN819202 Woo et al., 2012  
CaPdV dog/236/Hong Kong/2008 CG 8784 JN819203 Woo et al., 2012  
CaPdV dog/244U/Hong Kong/2008 CG 8784 JN819204 Woo et al., 2012  
CaPdV fox/Tod virus-1/AUS/2019 2C-3C 2058 MT833880 Campbell et al., 2020 Vulpes vulpes
CaPdV fox/Tod virus-2/AUS/2019 2A-3D 4263 MT833876 Campbell et al., 2020 Vulpes vulpes
CaPdV raccoon dog/RDX/CHA/2015 CG(p) 8715 MT498598 Yang et al., 2021 Nyctereutes procyonoides
             
CG = complete genome
(p) = partial gene sequence

 
  References

Campbell SJ, Ashley W, Gil-Fernandez M, Newsome TM, Di Giallonardo F, Ortiz-Baez AS, Mahar JE, Towerton AL, Gillings M, Holmes EC, Carthey AJR, Geoghegan JL. Red fox viromes in urban and rural landscapes. Virus Evol. 2020 Aug 25;6(2):veaa065. doi: 10.1093/ve/veaa065. PMID: 33365150; PMCID: PMC7744383.

Woo, P.C., Lau, S.K., Choi, G.K., Huang, Y., Teng, J.L., Tsoi, H.W., Tse, H., Yeung, M.L., Chan, K.H., Jin, D.Y. and Yuen, K.Y. (2012). Natural occurrence and characterization of two internal ribosome entry site elements in a novel virus, canine picodicistrovirus, in the picornavirus-like superfamily. J. Virol. 86: 2797-2808. Epub 2011 Dec 28.

Yang S, He Y, Chen X, Kalim U, Wang Y, Yang S, Qi H, Cheng H, Lu X, Wang X, Shen Q, Zhang W. Viral Metagenomics Reveals Diverse Viruses in the Feces Samples of Raccoon Dogs. Front Vet Sci. 2021 Jul 12;8:693564. doi: 10.3389/fvets.2021.693564. PMID: 34322538; PMCID: PMC8311183.
 
Copyright © 2006 - The Pirbright Institute, UK. All Rights Reserved.