| |
Genus: Kobuvirus
Species: Kobuvirus dekago
| Type: aichivirus
D1 (AiV-D1) |
|
| 5'
UTR |
L |
VP0 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Type:
aichivirus D2 (AiV-D2) |
|
| 5'
UTR |
L |
VP0 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| |
|
|
(White areas indicate genes which haven't yet been
sequenced completely;
grey areas are where only partial sequences exist)
| Virus |
Strain |
Region |
Length
|
Accession No. |
Reference |
Comments |
Aichivirus D1 (AiV-D1) or kagovirus 1 (KV-1)
|
|
AiV-D1 |
cattle/Kagoshima-1-22-KoV/2014/JPN |
CG(p) |
8087 |
LC055961 |
Otomaru et al.,
2015 |
|
| |
|
|
|
|
|
|
Aichivirus D2 (AiV-D2) or kagovirus 2 (KV-2)
|
|
AiV-D2 |
cattle/Kagoshima-2-24-KoV/2015/JPN |
CG |
8496 |
LC055960 |
Otomaru et al.,
2015 |
|
| |
|
|
|
|
|
|
Aichivirus D? (AiV-D?) - unassigned
|
|
AiV-D? |
sheep/SKoV-China/SWUN/AB18/2019 |
CG(p) |
8485 |
MW296158 |
Abi et al.,
2021 |
|
| AiV-D? |
cattle/BKV5/2021/CHN |
CG(p) |
8422 |
ON730709 |
Yu, unpub. |
|
| AiV-D? |
yak/SCDF-20/2023/CHN |
CG(p) |
8435 |
PV041437 |
Xu, unpub. |
|
| AiV-D? |
yak/SCDF-12/2023/CHN |
CG(p) |
8290 |
PV041438 |
Xu, unpub. |
|
| AiV-D? |
yak/QHHN16/2021/CHN |
CG(p) |
8484 |
OP776110 |
Yan, unpub. |
|
| AiV-D? |
yak/XZNQX7/2021/CHN |
CG(p) |
8477 |
OP776111 |
Yan, unpub. |
|
| AiV-D? |
yak/SCDF77/2021/CHN |
CG(p) |
8484 |
OP776109 |
Yan, unpub. |
|
| AiV-D? |
cattle/NXC1/2021/CHN |
CG(p) |
8492 |
OQ267712 |
Yan, unpub. |
|
| AiV-D? |
goat/KoV/KT-G4/2020-HUN |
CG(p) |
8446 |
OQ758029 |
Boros et al.,
2023 |
Capra hircus |
| |
|
|
|
|
|
|
CG = complete genome
(p) = partial gene sequence |
Abi KM, Yu Z, Jing ZZ, Tang C. Identification of a novel Aichivirus D in sheep.
Infect Genet Evol. 2021 Mar 16:104810. doi: 10.1016/j.meegid.2021.104810. Epub
ahead of print. PMID: 33741511.
Boros Á, Pankovics P, László Z, Urbán P, Herczeg R, Gáspár G, Tóth F, Reuter G.
The genomic and epidemiological investigations of enteric viruses of domestic
caprine (Capra hircus) revealed the presence of multiple novel viruses related
to known strains of humans and ruminant livestock species. Microbiol Spectr.
2023 Dec 12;11(6):e0253323. doi: 10.1128/spectrum.02533-23. Epub 2023 Oct 12.
PMID: 37823638; PMCID: PMC10714811.
Otomaru, K., Naoi, Y., Haga, K., Omatsu, T., Uto, T., Koizumi, M., Masuda, T.,
Yamasato, H., Takai, H., Aoki, H., Tsuchiaka, S., Sano, K., Okazaki, S.,
Katayama, Y., Oba, M., Furuya, T., Shirai, J., Katayama, K., Mizutani, T. and
Nagai, M. (2015). Detection of novel kobu-like viruses in Japanese black cattle
in Japan. J. Vet. Med. Sci. 15-0447 In press. DOI:10.1292/jvms.15-0447
|
